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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01994.1.g00130.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
NAC |
Protein Properties |
Length: 383aa MW: 41418.9 Da PI: 7.2509 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01994.1.g00130.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.9 | 2.4e-50 | 12 | 152 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknrat 78
lppGfrFhPtdee+v+ yL +k + + ++i+ v+++++ePwdLp+k+k +ek +wyfF+++d ky+tg+r+nrat
Zmw_sc01994.1.g00130.1.sm.mkhc 12 LPPGFRFHPTDEEVVTSYLVPKSLNPTSFNPRAIAVVNLNRCEPWDLPSKAKMGEKdQWYFFCQKDMKYPTGTRTNRAT 90
79********************99988666688***************766666555********************** PP
NAM 79 ksgyWkatgkdkevlsk...........kgelvglkktLvfykgrapkgektdWvmheyrle 129
++gyWkatgkd+e+++ +++l+g+kktLvfy+grap+g+kt+Wvmhe+rle
Zmw_sc01994.1.g00130.1.sm.mkhc 91 EKGYWKATGKDREIFKPgaspgdgggrrDDQLIGTKKTLVFYTGRAPRGTKTNWVMHEFRLE 152
****************9888888877766667***************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MVDQEEQGDL PLPPGFRFHP TDEEVVTSYL VPKSLNPTSF NPRAIAVVNL NRCEPWDLPS 60 KAKMGEKDQW YFFCQKDMKY PTGTRTNRAT EKGYWKATGK DREIFKPGAS PGDGGGRRDD 120 QLIGTKKTLV FYTGRAPRGT KTNWVMHEFR LEGAYRNHPN LRLSPKDEWV VCKVFHKSNG 180 EEDKKAAATA AVEDFAAGTP TVSSISVDAT GAVDGGDEFL DSMFFDPYFD YSTGTFPADN 240 HAATMMNDVG GFFGPPYDAF DDDRTSRNPL HQAAAVSSAT VPLVPTSSSG SYRSSWNTVP 300 SHYATGSSSY NLHDQAMMAR ALGGAGFPNF AGGGGFPSYS VPGISQQNSL RRRGYATGRL 360 ASSAAAAPVT ANSTGQAAKN LGP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-46 | 9 | 182 | 14 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-46 | 9 | 182 | 14 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-46 | 9 | 182 | 14 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-46 | 9 | 182 | 14 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swm_B | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swm_C | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swm_D | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swp_A | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swp_B | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swp_C | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
3swp_D | 5e-46 | 9 | 182 | 17 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-46 | 9 | 182 | 14 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-46 | 9 | 182 | 14 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |