PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01994.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Nin-like | ||||||||
Protein Properties | Length: 236aa MW: 25253.9 Da PI: 6.5493 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 38.9 | 1.7e-12 | 1 | 25 | 26 | 50 |
RWP-RK 26 gvclTvLKriCRqyGIkRWPhRkik 50 gv++ vLKriCR +GI RWP+Rk+ Zmw_sc01994.1.g00030.1.es.mkhc 1 GVGTGVLKRICRTHGIVRWPYRKLV 25 79*********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 11.308 | 1 | 47 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 7.2E-10 | 1 | 25 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
GVGTGVLKRI CRTHGIVRWP YRKLVSGKAG DDTKNSEREK AKELDTAAKQ KASSSSAMSS 60 ITSQAAGKSQ QGVSKAGGQI SPLGNQITSG GLALVSQTKG IPTFMDDFKF GFPSSGLSHE 120 TTKWWGASSD TDSAASAKDA TDESATQDAL KGMTDDDELD WGADEGEGEA DGSVTAEPSA 180 RLCSLRRKAV DDGRELLNDY TYGGRQEFSR LNKRQKLVLA QVFGAWLPQE WRSQLV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004967322.2 | 2e-99 | uncharacterized protein LOC101771632 | ||||
TrEMBL | A0A0A9PF78 | 1e-100 | A0A0A9PF78_ARUDO; Uncharacterized protein | ||||
STRING | Si002505m | 3e-99 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6705 | 32 | 42 |