PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01990.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 296aa MW: 32177.3 Da PI: 7.1544 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 100 | 150 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +grW+AeIrdp+ + +r +lg++ taeeAa+a+++a+++++g Zmw_sc01990.1.g00120.1.am.mkhc 100 KKYRGVRYRA-SGRWAAEIRDPR----QgRRAWLGTYCTAEEAARAYDRAARRIRG 150 59******99.7*********94....25*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.48E-17 | 100 | 158 | No hit | No description |
SuperFamily | SSF54171 | 6.41E-21 | 101 | 159 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.669 | 101 | 158 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-32 | 101 | 164 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.2E-11 | 101 | 150 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-28 | 101 | 158 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-7 | 102 | 113 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-7 | 124 | 140 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MCGGAILSDL TPSRVHRRLT AATLWPETQR ITTGSTTAGG KRKADDGDLT DEFEAEFQLF 60 EDDDGEEEES LAPPLAVSGA SVPSSPNKKP RVAAGPERGK KYRGVRYRAS GRWAAEIRDP 120 RQGRRAWLGT YCTAEEAARA YDRAARRIRG KSARLNFPLP HEGHRRAPVI DLNLPAASDD 180 TITMDVDAAS SGDICHPVLG GAEAMAITLM RVKELVTHQG PHDELLASAV SELTNGAATV 240 CSEARAIGAS RYAALICECN RQMEQIAALK RDLERHEGQL LARREKLVRM ISPALD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 4e-18 | 98 | 159 | 2 | 64 | ATERF1 |
3gcc_A | 4e-18 | 98 | 159 | 2 | 64 | ATERF1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004985472.1 | 7e-97 | ethylene-responsive transcription factor RAP2-12 | ||||
TrEMBL | K4ADI1 | 2e-95 | K4ADI1_SETIT; Uncharacterized protein | ||||
STRING | Si036647m | 3e-88 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13664 | 22 | 29 |