PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01977.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 463aa MW: 48269.7 Da PI: 10.1287

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01977.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.2	1.6e-37	170	230	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnysls+Pr+fCk+CrryWtkGG+lrn+P+Ggg+r+nk+s+ Zmw_sc01977.1.g00060.1.am.mk 170 PEQGLRCPRCDSPNTKFCYYNNYSLSKPRHFCKTCRRYWTKGGTLRNIPIGGGCRRNKRSR 230 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	3.8E-31	172	228	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-24	174	223	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.863	174	228	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	176	212	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
LRRARPPSRA CGPSLHSLLA SPCSSGTLQP RAPSSPACAA PSSHPVPYSP PTQRGAVLLC 60 TLLNSGCWMR EAEAKATPAA LGGGGGTNDR GAETTGAVWA KRSRRGRIFY PRALIEQIRV 120 ASVLAICILG APAVYGAMTA VAAGDELLKG GTSGGGGTTT PRQQQPPPPP EQGLRCPRCD 180 SPNTKFCYYN NYSLSKPRHF CKTCRRYWTK GGTLRNIPIG GGCRRNKRSR STTSRVSLNL 240 RSVTVNASID QQQSSTRLGR FLSGGGAMVM SSPIGGVTSA DYQPGAAAGS MPPPRLNIPA 300 VGQYVPFVEW SSGPTAVDIT GGGGNSSAAA AMRSTIASFI ESQSFINQDL HWKLQQQRLS 360 TVSLAQPTSS AAGHTAPRRV GAGAFMQISA GAPVMEPMPT VTSWIMDSSC VFLSPPQPAN 420 TTSAVMATTT PNCNINSGLS NGDHATFNNS CDVGTIPTDD PIP

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

LRRARPPSRA CGPSLHSLLA SPCSSGTLQP RAPSSPACAA PSSHPVPYSP PTQRGAVLLC  60
TLLNSGCWMR EAEAKATPAA LGGGGGTNDR GAETTGAVWA KRSRRGRIFY PRALIEQIRV  120
ASVLAICILG APAVYGAMTA VAAGDELLKG GTSGGGGTTT PRQQQPPPPP EQGLRCPRCD  180
SPNTKFCYYN NYSLSKPRHF CKTCRRYWTK GGTLRNIPIG GGCRRNKRSR STTSRVSLNL  240
RSVTVNASID QQQSSTRLGR FLSGGGAMVM SSPIGGVTSA DYQPGAAAGS MPPPRLNIPA  300
VGQYVPFVEW SSGPTAVDIT GGGGNSSAAA AMRSTIASFI ESQSFINQDL HWKLQQQRLS  360
TVSLAQPTSS AAGHTAPRRV GAGAFMQISA GAPVMEPMPT VTSWIMDSSC VFLSPPQPAN  420
TTSAVMATTT PNCNINSGLS NGDHATFNNS CDVGTIPTDD PIP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796800.1	4e-71	dof zinc finger protein DOF5.7-like
TrEMBL	A0A3L6SBJ5	5e-71	A0A3L6SBJ5_PANMI; Dof zinc finger protein DOF5.7-like
STRING	Si036311m	9e-69	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367