PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01957.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 273aa MW: 30676.8 Da PI: 6.8594

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01957.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.8	1.5e-20	89	140	3	55
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rl Wt eL e+F+ea+e L G ++A+P++i++ m+vk+Lt ++++SHLQk+R+ Zmw_sc01957.1.g00080.1.sm.mk 89 RLIWTVELQEKFLEAIEVL-GDKNAVPSRIVKQMNVKDLTAKQIASHLQKHRS 140 99***************.9****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.955	84	143	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.4E-19	85	143	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.05E-15	88	143	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.8E-19	89	141	IPR006447	Myb domain, plants
Pfam	PF00249	5.4E-7	92	139	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MQISYGVVSQ CGIVSKAMYA NDNEEASSEC MAVGACFHLP KPLTAGSFNM LRDTARQHKS 60 RRAAIKQQHL KGHTNSTKRD RFHSKKLDRL IWTVELQEKF LEAIEVLGDK NAVPSRIVKQ 120 MNVKDLTAKQ IASHLQKHRS RVKAYQRKFQ QNASKKAVPE LIRSEHNEST TVDEAWNEAL 180 VWGTQPSLVN IIEPITQETI VEETLVPDPV MQSAQTQEAA VGDAQVPDPV VQFVQTQEVA 240 VGAAPLHDHV MQFTQDDVYW SLSPSLADYD MLF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014660566.2	4e-33	uncharacterized protein LOC101775816 isoform X2
TrEMBL	A0A368QZ01	9e-32	A0A368QZ01_SETIT; Uncharacterized protein
STRING	Pavir.Db00207.1.p	4e-32	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13017	19	28