PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01923.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 514aa MW: 56601.5 Da PI: 9.9237 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 161.4 | 3.5e-50 | 95 | 239 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................kvka.eekewyfFskr 64 +ppGfrFhPtdeel+ +yLkkkv+ ++++l +vi+e+d++k+ePwdL+ ++ + ++ewyfFs++ Zmw_sc01923.1.g00040.1.am.mk 95 VPPGFRFHPTDEELLYYYLKKKVSFEPIDL-DVIREIDLNKLEPWDLKGagansqdlfmahadrcRIGTgPQEEWYFFSHK 174 69****************************.9***************94588999999888887644443556******** PP NAM 65 dkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dkky+tg+r+nrat++g+Wkatg+dk+++ g+ +gl+ktLvfy+grap+g+kt+W+mheyrl Zmw_sc01923.1.g00040.1.am.mk 175 DKKYPTGTRTNRATAAGFWKATGRDKAIFLGnAGRRIGLRKTLVFYTGRAPHGKKTEWIMHEYRL 239 *****************************9767888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.35E-54 | 92 | 259 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.56 | 95 | 259 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-27 | 96 | 239 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 514 aa Download sequence Send to blast |
MHAWRGIAGD LHAAAVNGHT HPPIFSGDRP AAPRALSRPA ARAAAGWSQQ GSDHLPAMHV 60 HAHLQVAGMA WWRCAGAGDA VMLDIWILDG SPLSVPPGFR FHPTDEELLY YYLKKKVSFE 120 PIDLDVIREI DLNKLEPWDL KGAGANSQDL FMAHADRCRI GTGPQEEWYF FSHKDKKYPT 180 GTRTNRATAA GFWKATGRDK AIFLGNAGRR IGLRKTLVFY TGRAPHGKKT EWIMHEYRLD 240 EDNVEVPEDG WVVCRVFKKN SIQRSFEQPG MKLGDEEELQ TLTPVDQKQG RLRNQLMHGG 300 FPAFDPFMHL PQLASPDATP GSGTSAFMSG TPALAMNPLE MGSSSQYMTK LTTVLAGANA 360 GDRIGAVADW SILDNLLASR QNLDQLFHGK LGGAAVEAPH HYQQQLPLLM ETGASSLPRL 420 PLHYLGCKAT DLLNLVAFVS RPRPAKFRHP GRGIESKGVE RVQARGAAAA AAAAAMVRRS 480 PFRRPPSLLT SNRASAVFSP PSPFQYKGRW PREH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-46 | 91 | 261 | 13 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-46 | 91 | 261 | 13 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-46 | 91 | 261 | 13 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-46 | 91 | 261 | 13 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-46 | 91 | 261 | 16 | 170 | NAC domain-containing protein 19 |
4dul_A | 3e-46 | 91 | 261 | 13 | 167 | NAC domain-containing protein 19 |
4dul_B | 3e-46 | 91 | 261 | 13 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025827212.1 | 1e-163 | NAC domain-containing protein 76-like | ||||
TrEMBL | A0A1E5VY61 | 1e-165 | A0A1E5VY61_9POAL; NAC domain-containing protein 76 (Fragment) | ||||
STRING | Pavir.Ab01037.1.p | 1e-159 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3461 | 37 | 81 |