PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01908.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 711aa    MW: 74556 Da    PI: 10.4596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01908.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-11217260855
                                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    Er RR+++++ +++L + lP +     +K +Ka+i+++A++YIk L+
  Zmw_sc01908.1.g00010.1.am.mk 217 TERDRRKKMRTLYSTLHSFLPRL----PEKADKATIVKEATDYIKTLE 260
                                   6*********************6....39****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.344209259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.15E-13212270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-9214260No hitNo description
Gene3DG3DSA:4.10.280.105.1E-12214268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-6215265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-8217260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.90.1170.201.8E-6678711IPR022412Quinolinate phosphoribosyl transferase, N-terminal
SuperFamilySSF546752.94E-5679707No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016763Molecular Functiontransferase activity, transferring pentosyl groups
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    Send to blast
MSQQGANLSQ DVEGSLPGGA GSEGTAGSGS SSAKQAVEII SSGWKPASPV INLPQEVQGT  60
HVGDASPGEA TPEAVVLAGT AGFNSSFSSV KLAAEDGGGG SKPASQLEVQ AGDKTAGSKP  120
PSPVVGLVAH AGEPDRPAAV VGAGGSDKGK EKDEPAAEEG AGDIAGSSSK SIKSSSDGDV  180
QGDAKDAPAP AAGGDGSGKR KGKGVAAEAD HALHMWTERD RRKKMRTLYS TLHSFLPRLP  240
EKADKATIVK EATDYIKTLE GTVHMLEKLK LERLKVAQLL GAGSNSSRRA AAPPPPMRHG  300
GGAAPAPAPA NMGTSSWNVP QATAAPPPPP PQVRPLQTWS LPNITVSVAR NEAFFALSAP  360
RQQAAVSKAL FVLDKFCIDV LTLHVSSDQT RCSLTIHTRL NAAAGNVALE LMTAETRYEL  420
AASELARWIN NAQEATRRRK ELRRRFRCVP IISGGIRAVF PRTTLSRLGP DIVAISHKYN  480
ALQVACTIEE PGRSPELREG REYYKQVSRW RGSSGTPRWI PFTSLSRTPN GALAASDRHT  540
AHGSSMLDRV RAGIPQLTAA ISTKVPAARQ NERASFSHSF VFLETQAATL HTPTAPWSSC  600
RAHRPSHLLS VLRLHLSRLV PPASLPSRRS LSRPNSAKQI RGGTLFREAR MAGTSAPAAS  660
ADASANGSHA AAAAQVGAPT NPMATALLTD QYQFSMAYAY WKAGKHADRA V
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20053691