PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01880.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 982aa    MW: 105803 Da    PI: 7.3241
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01880.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.78.7e-27197246251
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEE CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveit 51 
                                   +Dgy+WrKYGqK vk+s+fprsYYrCt+++Cpvkk+vers +d  vv++t
  Zmw_sc01880.1.g00070.1.am.mk 197 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCPVKKRVERSFQDAAVVITT 246
                                   8********************************************99987 PP
2WRKY51.81.6e-162462832259
                                   EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    sYYrCt+++Cpvkk+vers +d  vv++tYeg+H+h+
  Zmw_sc01880.1.g00070.1.am.mk 246 TSYYRCTTQKCPVKKRVERSFQDAAVVITTYEGKHTHP 283
                                   69***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-27181246IPR003657WRKY domain
SuperFamilySSF1182901.24E-22188246IPR003657WRKY domain
PROSITE profilePS5081129.907191285IPR003657WRKY domain
SMARTSM007743.3E-27196246IPR003657WRKY domain
PfamPF031061.2E-19197246IPR003657WRKY domain
SuperFamilySSF1182905.23E-13246285IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-14247285IPR003657WRKY domain
SMARTSM007748.6E-9247284IPR003657WRKY domain
Gene3DG3DSA:2.40.30.601.8E-12733817IPR002676RimM protein
SuperFamilySSF504476.71E-10733818IPR009000Translation protein, beta-barrel domain
PfamPF017823.3E-15736814IPR002676RimM protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006364Biological ProcessrRNA processing
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 982 aa     Download sequence    Send to blast
MADARRVDHG GGHQRHLSGD FQFHDDLASL FAQRLEAGTP MQQQPWFTDY LQQASTLTPL  60
DFDWFAGEFD MSTAVEEVKR ELAVDGTGAA SGVGMPGGGG GTSTTAPLMQ NSMSLSSTSS  120
EAFGAGGGAG AGEESPGKCK EEEGEGDESK DGSAAKGGGE MDGKNKKGAA KGKGKGEKRP  180
RQPRFAFMTK SEVDHLEDGY RWRKYGQKAV KNSPFPRSYY RCTTQKCPVK KRVERSFQDA  240
AVVITTSYYR CTTQKCPVKK RVERSFQDAA VVITTYEGKH THPIPPTLRG SARLLAAEHH  300
PGLHHPHFRM PPPPPRPMGG AAGFAYGRPG ATALDALGLL QPRPQGHHHA IQVQQLVSGA  360
GGGVQPQVNA AMASSHVGHV ALDQLGGLAA IAGTAGTAPA TTAAASVSTA PLRVQHFMAQ  420
DYAGLLQDIG VNLALPTASN ATATKLESQA PQDLAAVYHP RPAERGSRVL KPSMIHLFIR  480
DSDAVRARVD GSTVIHFFRL QAMRLRLHGD SKCSRGRPGR RELIARPCDG GVATSFSGLS  540
GSEREVSSDG GCSVHWARPQ RTSSTALEAW KWTGRSSCPA TAWGGLPRFP PALTVWAGRY  600
GRSNGSVFTA SLSTSPSYPL SSSSDSLTPG GSFPALRMAS PASASTSAPL SLSLPVRITC  660
FRFRLPSSFF GLSCPRVALA PARPCAALVS GLSDAREQDE DQEYYEEDAY EEEYDDDEEA  720
EELEYDDDEG EFELVEVGYV SGVHGVRGDV LVTPRTDFPE LRFATPGKRW LRARAAGKQK  780
VKGFQLVQGR AHTGKKGWIV SFDGINDLDE VWVLEELDLP IVSIPSKICS VSSRPAIGHP  840
LLFGTVASRG ADVGIKLCKA SEMEGDSFDL ILSIDQLNKM CRDVTQLRFS ARPEQHVHVE  900
LVDGQWVTVN PEAVNSHRLH ADVTTITRPW EARIGDEERI KCLLHVSRPA REWDEKRTGN  960
PSSEFPTSAA VPSGLWASVS SY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20184286275WRKY transcription factor 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62337173