PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01860.1.g00220.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 318aa MW: 33729.9 Da PI: 8.1443

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01860.1.g00220.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	180	1.1e-55	1	135	13	149
DUF822 13 EnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 EnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e+++ +g+s s sp Zmw_sc01860.1.g00220.1.es.mkhc 1 ENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGTKPPERMDGIGCSVSPSPY 79 9**************************************************************************** PP DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 ss+q +sp++sy+asp+ss fps +s+ +++ ++ + +lp+l++ s+ ++s Zmw_sc01860.1.g00220.1.es.mkhc 80 SSYQ--------TSPRASYNASPNSSLFPSGASSPFLPPTDIangidgNPILPWLKTFSNGTAS 135 **........8888888888888888888887777666555667768899999988876666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.7E-54	1	129	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
ENNKRRERRR RAIAAKIFAG LRAHGGYKLP KHCDNNEVLK ALCNEAGWVV EPDGTTYRKG 60 TKPPERMDGI GCSVSPSPYS SYQTSPRASY NASPNSSLFP SGASSPFLPP TDIANGIDGN 120 PILPWLKTFS NGTASKKHPL LPPLLIHGGS ISAPVTPPLS SPTARTPRMK TDWDESAVQP 180 PWHGANSPSV VNSTPPSPGR TTVPDPAWLA GIQIASTSPS SPTFSLVSTN PFSVFKEAIP 240 VCNSLRMCTP GQSGTCSPAI PGMPGHPDVH MMDAVSDEFA FGSSTNGGQQ AAGLVRAWEG 300 ERIHEESGSD DLDVTLKL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-21	12	63	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-21	12	63	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-21	12	63	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-21	12	63	391	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817932.1	0.0	protein BZR1 homolog 2
Swissprot	Q0JPT4	1e-165	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	A0A2S3HYR9	0.0	A0A2S3HYR9_9POAL; Uncharacterized protein
STRING	Pavir.Ea00221.1.p	1e-179	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]