PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01797.1.g00060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 210aa MW: 22977.2 Da PI: 8.7538 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.5 | 3.7e-51 | 9 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelv++yL++k++g +l + v++evd+y+++Pw+Lp+k+ ++ekewyfFs+rd+ky++g+r+nra+ +g Zmw_sc01797.1.g00060.1.am.mk 9 LPPGFRFHPTDEELVNYYLCRKCAGLPLAA-PVMAEVDLYRFDPWQLPEKAMGGEKEWYFFSPRDRKYPNGSRPNRAAGTG 88 79*************************999.89***************8888999************************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg dk+v s + v +kk Lvfy g+ pkg+kt+W+mheyrl Zmw_sc01797.1.g00060.1.am.mk 89 YWKATGADKPVGS--PRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL 133 ***********99..779***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.58E-57 | 6 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.049 | 9 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.3E-27 | 10 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MDCGGALQLP PGFRFHPTDE ELVNYYLCRK CAGLPLAAPV MAEVDLYRFD PWQLPEKAMG 60 GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPVG SPRPVAIKKA LVFYAGKPPK 120 GVKTNWIMHE YRLADVDRSA AARKRTSNAL RPSAGWFDDV VDWGGGGADD GFDVDVGGAA 180 LFALPSPVGF PGARDAVAIG EMFAYLQRPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-68 | 2 | 133 | 8 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the promoter of the stress response gene LEA19. Involved in tolerance to abiotic stresses. {ECO:0000269|PubMed:20632034}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by dehydration, salt stress, cold stress, abscisic acid (ABA) and methyl jasmonate. {ECO:0000269|PubMed:20632034}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015697580.1 | 1e-101 | PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 71-like | ||||
Swissprot | Q53NF7 | 4e-95 | NAC71_ORYSJ; NAC domain-containing protein 71 | ||||
TrEMBL | A0A1X7YEW9 | 1e-99 | A0A1X7YEW9_MAIZE; Uncharacterized protein | ||||
TrEMBL | C0PNU1 | 4e-99 | C0PNU1_MAIZE; Uncharacterized protein | ||||
STRING | GRMZM2G123667_P02 | 5e-98 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11804 | 30 | 39 |
Publications ? help Back to Top | |||
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