PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01694.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

DBB

Protein Properties

Length: 474aa MW: 50028.2 Da PI: 7.6105

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01694.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.2e-05	115	156	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C H H + Zmw_sc01694.1.g00150.1.am.mk 115 VLCSACEAAEARVLCCADKAALCARCDRDVHAAnrlagkHHR 156 57****99****************99955667777554 PP
2	zf-B_box	18.9	3.1e-06	191	223	12	37
zf-B_box 12 ke.lqlfCedCqqllCedClleeHkg......H 37 ++ + +fC +++ llC++C ++ H H Zmw_sc01694.1.g00150.1.am.mk 191 EChAYFFCVEDRALLCRSCDVAVHTAnafvsaH 223 33499*****************99545566666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50119	10.495	112	159	IPR000315	B-box-type zinc finger
SMART	SM00336	1.9E-9	112	159	IPR000315	B-box-type zinc finger
CDD	cd00021	3.76E-7	115	159	No hit	No description
SMART	SM00336	2.0E-7	184	228	IPR000315	B-box-type zinc finger
CDD	cd00021	3.82E-6	190	228	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MGSRDVASTC RSIPTPPARS TAVTSVSFPA FTPSIISRRC PLPRRSFFTS PPNRQSVTLT 60 AADLSWPAPS DKTAPLFPSY PLRQTAPPTT LLPPADHRSR ESVHGRARRI WSMKVLCSAC 120 EAAEARVLCC ADKAALCARC DRDVHAANRL AGKHHRLPLL APGAITAPNC DICQVPAASE 180 PLSPASAAPQ ECHAYFFCVE DRALLCRSCD VAVHTANAFV SAHRRFLLTG VQVGLQPDAQ 240 ETEQHTPTAS TAAAAASLQT PPPPPPAKKS SSPAPLYSDD DIDWAAGPDG GLSGNLPDWC 300 VVDEQFNAPV QKSVDPVATK PPAKRSPRGA IVSAYGGQGG VTGGMQAWPL DEFFGFSEFN 360 AGLGLTENST SKADSGKLGS TDGSPNGWSS SDIAQDFFGQ VPEVHHQWSV PELPSPPTAS 420 GLHLQGGPRH DRSATTDATA MSVPDISSPG NPFRCFAADT GQPLPAPPAK RRRY

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MGSRDVASTC RSIPTPPARS TAVTSVSFPA FTPSIISRRC PLPRRSFFTS PPNRQSVTLT  60
AADLSWPAPS DKTAPLFPSY PLRQTAPPTT LLPPADHRSR ESVHGRARRI WSMKVLCSAC  120
EAAEARVLCC ADKAALCARC DRDVHAANRL AGKHHRLPLL APGAITAPNC DICQVPAASE  180
PLSPASAAPQ ECHAYFFCVE DRALLCRSCD VAVHTANAFV SAHRRFLLTG VQVGLQPDAQ  240
ETEQHTPTAS TAAAAASLQT PPPPPPAKKS SSPAPLYSDD DIDWAAGPDG GLSGNLPDWC  300
VVDEQFNAPV QKSVDPVATK PPAKRSPRGA IVSAYGGQGG VTGGMQAWPL DEFFGFSEFN  360
AGLGLTENST SKADSGKLGS TDGSPNGWSS SDIAQDFFGQ VPEVHHQWSV PELPSPPTAS  420
GLHLQGGPRH DRSATTDATA MSVPDISSPG NPFRCFAADT GQPLPAPPAK RRRY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025819038.1	1e-155	B-box zinc finger protein 22-like
TrEMBL	A0A0A9LRZ4	1e-170	A0A0A9LRZ4_ARUDO; Uncharacterized protein
STRING	Pavir.Eb00238.1.p	1e-165	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1794	33	82