PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01684.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 105aa MW: 11227.4 Da PI: 5.1038

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01684.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.7	7e-14	67	104	1	38
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm 38 rW++qe+laL+++r+em+ ++r+++lk+plWeevs+++ Zmw_sc01684.1.g00060.1.sm.mk 67 RWPRQETLALLKIRSEMDAAFREAALKGPLWEEVSRYV 104 8**********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence Send to blast
MQQQQQQPGM PPFSPTAGAG TTTAQPSPIS SRPPEGHPEP GAGGSAPRAE DSFDHEGDRS 60 GSSVGSRWPR QETLALLKIR SEMDAAFREA ALKGPLWEEV SRYVV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription repressor that binds specific DNA sequence such as GT3 box 5'-GGTAAA-3' in the SDD1 promoter. Negative regulator of water use efficiency (WUE) via the promotion of stomatal density and distribution by the transcription repression of SDD1. Regulates the expression of several cell cycle genes and endoreduplication, especially in trichomes where it prevents ploidy-dependent plant cell growth. {ECO:0000269\|PubMed:19717615, ECO:0000269\|PubMed:21169508}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by water stress. {ECO:0000269\|PubMed:21169508}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004986012.1	1e-26	trihelix transcription factor GTL1 isoform X1
Refseq	XP_004986013.1	1e-26	trihelix transcription factor GTL1 isoform X2
Refseq	XP_015689742.1	7e-29	PREDICTED: trihelix transcription factor GT-2-like
Swissprot	Q9C882	1e-14	GTL1_ARATH; Trihelix transcription factor GTL1
TrEMBL	J3LJ74	2e-26	J3LJ74_ORYBR; Uncharacterized protein
STRING	OB03G11000.1	4e-27	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15223	12	18

Publications ? help Back to Top
Caro E,Desvoyes B,Gutierrez C GTL1 keeps cell growth and nuclear ploidy under control. EMBO J., 2012. 31(24): p. 4483-5 [PMID:23188085] Zheng X, et al. The Wheat GT Factor TaGT2L1D Negatively Regulates Drought Tolerance and Plant Development. Sci Rep, 2016. 6: p. 27042 [PMID:27245096] Shibata M, et al. GTL1 and DF1 regulate root hair growth through transcriptional repression of ROOT HAIR DEFECTIVE 6-LIKE 4 in Arabidopsis. Development, 2018. [PMID:29439132]