PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01649.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 190aa MW: 19295.4 Da PI: 8.965 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 34.7 | 3.9e-11 | 1 | 23 | 33 | 55 |
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 ++lm+v+gLt+e+v+SHLQkYRl Zmw_sc01649.1.g00150.1.sm.mk 1 MQLMSVDGLTRENVASHLQKYRL 23 79********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.3E-11 | 1 | 28 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.6E-8 | 2 | 23 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 3.4E-5 | 2 | 27 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MQLMSVDGLT RENVASHLQK YRLYLKRMQG VGGAGGGGGG GAGGGHSSGS GTDAATEHLF 60 ATGPVPFLPP GHGHRAPAGA DPYPPFAPMG AAHHHHHHHH PPQIGHFHHP ARPLGHYGAA 120 GSGFDHGFLS RSVAPPVGPP GMHHRMVGGA AGMGMIAPGS YGDDLDLGSR GGGSNGGRRE 180 LTLFPTSGDH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001310197.1 | 9e-65 | uncharacterized protein LOC107548110 | ||||
TrEMBL | A0A1E5WG62 | 1e-69 | A0A1E5WG62_9POAL; Transcription factor LUX | ||||
STRING | GRMZM2G471600_P01 | 3e-64 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1620 | 34 | 105 |