PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01639.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 696aa MW: 72889 Da PI: 11.1408

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01639.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.2	5.7e-11	490	514	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 pr+rWt++LH+rFv+ave LGG+e+ Zmw_sc01639.1.g00010.1.am.mk 490 PRMRWTSTLHARFVHAVEVLGGHER 514 9*********************997 PP
2	G2-like	37.3	6.1e-12	555	579	27	51
G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51 AtPk++lelm+vk+Ltl+hvkSHLQ Zmw_sc01639.1.g00010.1.am.mk 555 ATPKSVLELMDVKDLTLAHVKSHLQ 579 9************************ PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.3E-22	488	514	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.3E-22	555	579	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-7	555	579	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence Send to blast
MLVHGLGSRH IAGRWPVSIE ATKRSNGIQF PSLKRKSLHS NQAADRGASI RRQRQRQFMS 60 AAAAQLLVND ASSLITALIM PGGGGAAVSS WSKPRSSLCL PGGMGNGTGL KLAATVNLLH 120 VSTWTHSGGV KLGSLCPCGH VPKDKRKKKN GIDGAINPVD SKVAGCRLLR ETHGKPARSY 180 MATETAAVRS CERSMVQAQL LELPDTHFPF HPSLPYLSKG RGSSPLAPRR RERGAASMEA 240 TASAPDLSLH ISLPSGNAAS PSSAPGLGAG GVVGGRGAAG SPGGDPWRRL NGSTASTELS 300 LSPPQRQQEG AASALPWRLR PSTAANAPSS SSSASSAEAA AFLPVTVPRL SLDAAASAEA 360 ARGRPINGVP VYSSPGAGSS PFLGAGDYRQ RQPKVGLYNP YPSSAWPSSL RSTTAAVPAP 420 VDTTTAAFHH SPSAYHRMLS GTGRLHLHGA LADTLRSYGA GHQQYFGSSL ASSRYVPRFP 480 AASRRGMRAP RMRWTSTLHA RFVHAVEVLG GHEREWSPPA GQFRGNLGSF HARVTRSAKL 540 LRLISLSPYV HGPGATPKSV LELMDVKDLT LAHVKSHLQA SELSPLAQQL KLNARERKPG 600 VLVHLRLSRL TMQAAAIPRE SEEGEPRPID GGGSGDDDLP NAEQAQSAGD LNRQPFAGLG 660 RSASSEGATS QFGGGDVECS SADDSDGSRV RSTSSR

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence Send to blast

MLVHGLGSRH IAGRWPVSIE ATKRSNGIQF PSLKRKSLHS NQAADRGASI RRQRQRQFMS  60
AAAAQLLVND ASSLITALIM PGGGGAAVSS WSKPRSSLCL PGGMGNGTGL KLAATVNLLH  120
VSTWTHSGGV KLGSLCPCGH VPKDKRKKKN GIDGAINPVD SKVAGCRLLR ETHGKPARSY  180
MATETAAVRS CERSMVQAQL LELPDTHFPF HPSLPYLSKG RGSSPLAPRR RERGAASMEA  240
TASAPDLSLH ISLPSGNAAS PSSAPGLGAG GVVGGRGAAG SPGGDPWRRL NGSTASTELS  300
LSPPQRQQEG AASALPWRLR PSTAANAPSS SSSASSAEAA AFLPVTVPRL SLDAAASAEA  360
ARGRPINGVP VYSSPGAGSS PFLGAGDYRQ RQPKVGLYNP YPSSAWPSSL RSTTAAVPAP  420
VDTTTAAFHH SPSAYHRMLS GTGRLHLHGA LADTLRSYGA GHQQYFGSSL ASSRYVPRFP  480
AASRRGMRAP RMRWTSTLHA RFVHAVEVLG GHEREWSPPA GQFRGNLGSF HARVTRSAKL  540
LRLISLSPYV HGPGATPKSV LELMDVKDLT LAHVKSHLQA SELSPLAQQL KLNARERKPG  600
VLVHLRLSRL TMQAAAIPRE SEEGEPRPID GGGSGDDDLP NAEQAQSAGD LNRQPFAGLG  660
RSASSEGATS QFGGGDVECS SADDSDGSRV RSTSSR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025820100.1	1e-106	probable transcription factor RL9 isoform X2
TrEMBL	A0A3L6RKZ8	1e-113	A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRING	Pavir.Fb00812.1.p	1e-116	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2558	37	87