PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01626.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 26897.3 Da PI: 6.7186 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.9 | 4.2e-49 | 23 | 155 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrk 74 pGfrFhPtd+elv +yLk+kve+k +++ ++ike+d+yk +PwdLp+ + a+ekewyfF+ r +ky+++ r+ Zmw_sc01626.1.g00150.1.am.mk 23 FPGFRFHPTDQELVGFYLKRKVERKGFSI-DIIKEIDVYKRDPWDLPSeawpvvlaQGGAGEKEWYFFCLRGRKYRNSIRP 102 69***************************.99**************95589988765556899****************** PP NAM 75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 nr+t sg+Wkatg dk++++ +ge vglkk+Lv+y g+a kg+ktdW+mhe+rl Zmw_sc01626.1.g00150.1.am.mk 103 NRVTGSGFWKATGIDKPIHD-GGECVGLKKSLVYYVGSAGKGTKTDWMMHEFRL 155 ********************.9******************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-52 | 22 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 47.72 | 22 | 183 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-25 | 24 | 155 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MEKKPMEESG STGVGGNEDD LVFPGFRFHP TDQELVGFYL KRKVERKGFS IDIIKEIDVY 60 KRDPWDLPSE AWPVVLAQGG AGEKEWYFFC LRGRKYRNSI RPNRVTGSGF WKATGIDKPI 120 HDGGECVGLK KSLVYYVGSA GKGTKTDWMM HEFRLRAATS FKSTTTDLSE AHHATLHCQP 180 FQLHGFHEVS PEEVTETKTS ATVGTSSPSA SGWSELTSFV PDAGSTCWDE LGRILEISPR 240 I |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swm_B | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swm_C | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swm_D | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swp_A | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swp_B | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swp_C | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
3swp_D | 1e-47 | 24 | 155 | 22 | 145 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002443628.1 | 1e-81 | transcription factor JUNGBRUNNEN 1 | ||||
Refseq | XP_014660370.1 | 2e-81 | transcription factor JUNGBRUNNEN 1 | ||||
Swissprot | Q9SK55 | 5e-70 | NAC42_ARATH; Transcription factor JUNGBRUNNEN 1 | ||||
TrEMBL | A0A1E5WKN5 | 4e-87 | A0A1E5WKN5_9POAL; Transcription factor JUNGBRUNNEN 1 | ||||
STRING | Sb08g022560.1 | 4e-81 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1191 | 38 | 129 |