PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01595.1.g00130.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 437aa MW: 45813.7 Da PI: 4.5432

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01595.1.g00130.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.6	6e-29	139	196	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC++ +C+++k+ver+++d+ ++++tY+geH h+ Zmw_sc01595.1.g00130.1.sm.mk 139 DLWAWRKYGQKPIKGSPYPRGYYRCSTDkDCKARKQVERCRDDTGTLIVTYTGEHSHP 196 99*********************9998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	7.0E-30	128	198	IPR003657	WRKY domain
PROSITE profile	PS50811	30.951	132	198	IPR003657	WRKY domain
SuperFamily	SSF118290	8.11E-26	135	198	IPR003657	WRKY domain
SMART	SM00774	7.0E-35	137	197	IPR003657	WRKY domain
Pfam	PF03106	3.6E-24	139	196	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence Send to blast
MEGDLGWCRG GGSSSNNWDL HAVVRFACGD AAPSSSVPPP DDAFPWPGPL QPLLTDPAVD 60 GLCQALLAAP KQEAAPLSSP RNEAPATTQQ PAPPAEEAPA KPLASGRGGG RPTRSKRKSK 120 KSQVNKEVTR VAAGAPSPDL WAWRKYGQKP IKGSPYPRGY YRCSTDKDCK ARKQVERCRD 180 DTGTLIVTYT GEHSHPVPLH RNSLAGTTRR KPQQQPSAAS PTAEETESQQ AQSPALASSA 240 AEETQQQGTP SACTGLSPST PLRSSSVGVE YEDEEDDDTL TVRLLLEDTE MAAEDDALLF 300 FQPDEPAPPG VPGSGVGCDD VMLLPKPEEL APMSGNGSGV CDDAMLFHNN KPDEPAGPPG 360 TVSSGGGAED VNMLFPKPSE PQDPQRTMVS AGIANVDAGT ASVINFVDEK FSVSGLSAWE 420 AAAAAGACDS CIHCHGW

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence Send to blast

MEGDLGWCRG GGSSSNNWDL HAVVRFACGD AAPSSSVPPP DDAFPWPGPL QPLLTDPAVD  60
GLCQALLAAP KQEAAPLSSP RNEAPATTQQ PAPPAEEAPA KPLASGRGGG RPTRSKRKSK  120
KSQVNKEVTR VAAGAPSPDL WAWRKYGQKP IKGSPYPRGY YRCSTDKDCK ARKQVERCRD  180
DTGTLIVTYT GEHSHPVPLH RNSLAGTTRR KPQQQPSAAS PTAEETESQQ AQSPALASSA  240
AEETQQQGTP SACTGLSPST PLRSSSVGVE YEDEEDDDTL TVRLLLEDTE MAAEDDALLF  300
FQPDEPAPPG VPGSGVGCDD VMLLPKPEEL APMSGNGSGV CDDAMLFHNN KPDEPAGPPG  360
TVSSGGGAED VNMLFPKPSE PQDPQRTMVS AGIANVDAGT ASVINFVDEK FSVSGLSAWE  420
AAAAAGACDS CIHCHGW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5w3x_B	1e-17	139	198	18	79	Disease resistance protein RRS1
5w3x_D	1e-17	139	198	18	79	Disease resistance protein RRS1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025812935.1	1e-110	WRKY transcription factor 22-like
TrEMBL	A0A1E5VAE7	1e-113	A0A1E5VAE7_9POAL; WRKY transcription factor 22
STRING	Pavir.Da00956.1.p	1e-108	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12562	25	36