PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01560.1.g00220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 153aa MW: 18276.2 Da PI: 10.3589 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.5 | 5.3e-53 | 8 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 + pGfrFhPtde lv yL++k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t++g Zmw_sc01560.1.g00220.1.am.mk 8 MLPGFRFHPTDEKLVRLYLERKIQQKSLPI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTRAG 87 579***************************.89***************9888999************************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d++++s+ +++ +glkk+Lvfykgra kg+ktdW+mhe+rl Zmw_sc01560.1.g00220.1.am.mk 88 FWKATGTDRPIYSSdRSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 135 *************967778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-54 | 6 | 140 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.357 | 8 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-25 | 10 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MEKQEEVMLP GFRFHPTDEK LVRLYLERKI QQKSLPIELI RQLDIYKYDP WDLPKLASTG 60 EKEWYFYCPR DRKYRNSTRP NRVTRAGFWK ATGTDRPIYS SDRSKCIGLK KSLVFYKGRA 120 AKGVKTDWMM HEFRLPSLTD PSLQQKKPLE KTI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-52 | 10 | 135 | 17 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002454285.1 | 1e-104 | putative NAC domain-containing protein 94 | ||||
Refseq | XP_020171862.1 | 1e-104 | putative NAC domain-containing protein 94 | ||||
Swissprot | Q9FIW5 | 4e-85 | NAC94_ARATH; Putative NAC domain-containing protein 94 | ||||
TrEMBL | A0A287UQU3 | 1e-103 | A0A287UQU3_HORVV; Uncharacterized protein | ||||
STRING | Sb04g028015.1 | 1e-103 | (Sorghum bicolor) | ||||
STRING | Traes_6BL_A169A3ECB.1 | 1e-103 | (Triticum aestivum) | ||||
STRING | Traes_6DL_DA233B945.1 | 1e-103 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13717 | 26 | 29 |