PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01546.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family EIL
Protein Properties Length: 444aa    MW: 47320.9 Da    PI: 5.3963
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01546.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3644.2e-20134237132232
                                   ----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--....-----GGG--HHHHHHH CS
                          EIN3 132 eshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg...tppykkphdlkkawkvsv 209
                                    s  l +l  Ttl  +Ls lm  c+pp r+++   g +p WWPt +e ww++l +++  +   + p+   + lkk+++v+v
  Zmw_sc01546.1.g00100.1.am.mk 134 LSAALDQLHSTTLARMLSELMAVCQPPVRQYESRSGAPPRWWPTASESWWASLVAAHLPRiptPVPFVGGKLLKKVHRVAV 214
                                   5678999********************************************888777777877779999999********* PP

                                   HHHHHHHTGGGHHHHHHTTTTSS CS
                          EIN3 210 Ltavikhmsptieeirelerqsk 232
                                   L a +kh+sp+++ i   +r+ +
  Zmw_sc01546.1.g00100.1.am.mk 215 LVAIVKHLSPDFAPIASAVRRCR 237
                                   ***************99998754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.3E-22130237No hitNo description
Gene3DG3DSA:1.10.3180.102.8E-33134256IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-30136255IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MTAGMVWASA GTGFTLHGKR KKRTARSAPR DGVAVPAMAF PVTGVSGAAS RWSTVAVLEA  60
SRRAAELPPS PAMVGALLGA ARNAMALSAQ QKSISEAPLV FAHAAGQLVP VPIRFYGYMP  120
MASMSTSSGA PLPLSAALDQ LHSTTLARML SELMAVCQPP VRQYESRSGA PPRWWPTASE  180
SWWASLVAAH LPRIPTPVPF VGGKLLKKVH RVAVLVAIVK HLSPDFAPIA SAVRRCRLPA  240
SEATLWNSAL ENELACCVRP VYIVQMQQQG CLLPPSHAVA ANDGVNPPAD NGDQVVVGAE  300
ELVKPPQEQH SSVALPADDY QQVANLTGDG GAHVVTAPSY EILQVATTEA EPDKSQPEQE  360
GDVDASVFAP SDLLQLEDMP LPLPAEQADD DLHQPADHFG KDFGAAAEVE GPEDRPWYED  420
KELRRIFAGM PIGLPHSFDD GWFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-191372625131Protein ETHYLENE INSENSITIVE 3
4zds_B2e-191372625131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGSb02g006580.11e-35(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818