PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01542.1.g00160.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 291aa MW: 31787.5 Da PI: 6.8503

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01542.1.g00160.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35	3.1e-11	158	203	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Zmw_sc01542.1.g00160.1.am.mk 158 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 203 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.9E-14	154	218	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.76	156	212	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.55E-11	158	212	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.1E-14	158	212	No hit	No description
Pfam	PF00170	4.6E-10	158	208	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.03E-24	159	209	No hit	No description
PROSITE pattern	PS00036	0	161	176	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MAQLPPKVPT MAPAWPEFGG AHHHHQHQRS PSVGALLAAA PMPPLPPQHA QQQPSWVDEF 60 LDFSAAKRGA HRRTVSDDNA GVGAHEFDRL DDDQLLSMFA DDLAPPIPQT APAQSSSSPS 120 DHNSFNDEKP EKGEKEEAQS KCKGDGAASA APAPVDPKRV KRILANRQSA QRSRVRKLQY 180 ISELERSVTS LQTEVSALSP RVAFLDHQRS LLTLGNSHLK QRIAALAQDK IFKDAHQEAL 240 KKEIQRLRQI YHQQVLQNAE SPTTDDPPIR SDEDVLIAAS EGTAAAPCPP S

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269\|PubMed:18065552}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817786.1	1e-136	basic leucine zipper 2-like
Swissprot	Q5QNI5	1e-99	BZP02_ORYSJ; Basic leucine zipper 2
TrEMBL	A0A2S3HYX3	1e-134	A0A2S3HYX3_9POAL; Uncharacterized protein
TrEMBL	A0A2T7DSS5	1e-134	A0A2T7DSS5_9POAL; Uncharacterized protein
STRING	Si002311m	1e-133	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]