PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01498.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 300aa MW: 30432.7 Da PI: 5.3534

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01498.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30	1.1e-09	250	287	26	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +e+eeL +kv+eL++eN L+ el +lkk ++ +++e+ Zmw_sc01498.1.g00040.1.sm.mkhc 250 QECEELGKKVAELTTENNILRAELANLKKACQDMETEN 287 89********************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	3.7E-9	111	228	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.5E-5	250	284	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MPSSSDEQPK PPEPPAAVVP AAVTAAPQTH AEWAASMQAY YAAAGHPYAW PAQHLMAAAA 60 AGATYGAPVP FPVYHPGAAA AYYAHASMAA GVPYPTPEAA AAAAVAAEGK GKGKGGGASS 120 EKGNSGEDAS RSGDSGSEES SDTRDDDTDH KDSSAPKKRK SGNTSGEGEP SHPAVVHYPA 180 VESPFPVKGR SASKLPVSAP GRAALPNATP NLNIGMDLWT ASPALAVPAV QGEANPGLAL 240 ARRDGAAPLQ ECEELGKKVA ELTTENNILR AELANLKKAC QDMETENARL MSSQLTAGPL

Functional Description ? help Back to Top
Source	Description
UniProt	Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001105491.1	1e-120	maize Em binding protein-1a
Swissprot	P25032	2e-33	EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBL	A0A3B6AY42	1e-122	A0A3B6AY42_WHEAT; Uncharacterized protein
TrEMBL	A0A446KY93	1e-122	A0A446KY93_TRITD; Uncharacterized protein
STRING	Traes_2BL_245DDBC7B.2	1e-120	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2160	36	92