PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01486.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 268aa MW: 29767.9 Da PI: 9.2784

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01486.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	32.6	1.6e-10	95	144	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYG K+ +s fpr +r + +++++dp ++ +tY ++H+++ Zmw_sc01486.1.g00040.1.am.mk 95 DDGHQWRKYGEKKLSNSSFPRFVFRSQVQ--------QKDTSDPPLFSVTYFNHHTCS 144 8*******************9996443........356779**********996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.4E-11	84	144	IPR003657	WRKY domain
SuperFamily	SSF118290	3.79E-13	87	145	IPR003657	WRKY domain
PROSITE profile	PS50811	9.179	89	160	IPR003657	WRKY domain
SMART	SM00774	5.8E-14	94	145	IPR003657	WRKY domain
Pfam	PF03106	8.7E-12	95	143	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MDSNASLLRW DSSTKPKILW RESRPPSEFS EETSPLPSVQ PPASYLHFIL AMALDSVPPY 60 PGGDLAASRA TSRAHQQRIR KDERSWTTDT YAPYDDGHQW RKYGEKKLSN SSFPRFVFRS 120 QVQQKDTSDP PLFSVTYFNH HTCSTSSGPM GRGSYTRDAT VQSSPKKAVS ICFSSHSSSE 180 QPTFLTSAVT PASPNTQSYR ANQQLDRSAY AGRQFQWPGT SSPGSNGLLK MEIDNFSEAS 240 ASSSSSGVLS RTLLPIGQSR CIEYFHFL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004978524.1	1e-94	probable WRKY transcription factor 64
TrEMBL	A0A3L6R880	1e-96	A0A3L6R880_PANMI; Putative WRKY transcription factor 48
STRING	Pavir.J31578.1.p	1e-94	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2032	35	100