PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01445.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 551aa MW: 60878.8 Da PI: 10.9124 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.6 | 1.1e-48 | 68 | 204 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........kvkaeekewyfFskrdkkyatgk 72 lppGfrF P+deelv++yL kkv++++ ++ evd++ ePw+Lp ++k + +ewyfFs rd+kyatg+ Zmw_sc01445.1.g00020.1.am.mk 68 LPPGFRFYPSDEELVCHYLYKKVANERAAQ-GTLVEVDLHAREPWELPGepwpvlvyhAAKLTASEWYFFSFRDRKYATGS 147 79*************************776.78**************955999998764445778**************** PP NAM 73 rknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 r+nratk+gyWkatgkd+ev s ++++vg++ktLvfy+grap+g+k+ W+mhe+rl Zmw_sc01445.1.g00020.1.am.mk 148 RTNRATKTGYWKATGKDREVRSPaTRAVVGMRKTLVFYQGRAPNGVKSCWIMHEFRL 204 **********************977788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.72E-54 | 65 | 242 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.282 | 68 | 242 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.0E-27 | 69 | 204 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence Send to blast |
MSSISALSNL PPKPAGWLEL MATLPVEYRS LLLPGQAFHL YLPGRSAGRL ADRGRQRGMG 60 LREIESTLPP GFRFYPSDEE LVCHYLYKKV ANERAAQGTL VEVDLHAREP WELPGEPWPV 120 LVYHAAKLTA SEWYFFSFRD RKYATGSRTN RATKTGYWKA TGKDREVRSP ATRAVVGMRK 180 TLVFYQGRAP NGVKSCWIMH EFRLNSPHSP PKVTFRRQTD QLLDIRPLHN TEDWVLCRVF 240 QKRKDSEQEA AGSSRAVVPL DQPVLEALTD HQTAGSSAGF APPQDNNALL SAAIWQYGSV 300 LDHQYPQEVS SSPMMTMTGL VGSRGVGDVC GFFYDAGFEE TAVNIAGVGF PQGSALDSFP 360 AWDGPLQPSA SQFPHDFRRL PVPVAPTRPT GVRPRYRKAT ARTRPQELGS LGARPDRDGP 420 WRQRGRGGTS SARASVHSST RKHRWTARGP GRPEPPPRQR DNPGGPSPSA DTEYRDPRAT 480 VTRAGPRPRR IDRSSQTHTA PRQGPARAPA GLLAGAAAAQ WTACVLPASF LPGGRRRTRP 540 TTIPIPARRA W |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-44 | 59 | 248 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-44 | 59 | 248 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-44 | 59 | 248 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-44 | 59 | 248 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-44 | 59 | 248 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-44 | 59 | 248 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-44 | 59 | 248 | 4 | 171 | NAC domain-containing protein 19 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025824637.1 | 1e-133 | protein CUP-SHAPED COTYLEDON 1-like | ||||
TrEMBL | A0A2T7CXR4 | 1e-132 | A0A2T7CXR4_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A3L6QAB8 | 1e-132 | A0A3L6QAB8_PANMI; NAC domain-containing protein 21/22-like | ||||
STRING | Pavir.Ga01251.1.p | 1e-132 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP697 | 38 | 166 |