PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01439.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 665aa MW: 71277.4 Da PI: 8.9209 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.8e-17 | 458 | 507 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g Zmw_sc01439.1.g00150.1.am.mk 458 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 507 69****998.**********9...336************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.8E-29 | 457 | 515 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.3E-10 | 458 | 507 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.13E-15 | 458 | 517 | No hit | No description |
SuperFamily | SSF54171 | 1.31E-18 | 458 | 516 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.0E-34 | 458 | 521 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.575 | 458 | 515 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-8 | 459 | 470 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-8 | 481 | 497 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 665 aa Download sequence Send to blast |
MEGSEEMERT PEVKIRHAVG LGSRARQLMP PKWSGTGGDD CLTAAGGPPG EVDEARTLAF 60 RSGLKDRGAE NGFAPRREAG REHVSGALRV SAPPRRPTQR NVSELSLSIA IPESATIRAT 120 DLKAAVGIST STRFPPVQLQ LAGSPPPASA PTARTDQKPK RNPHSRSTRP PLGSPPYAEV 180 IWRHSGARSH RTHPVAVAAR PHATRGEAAR EGAEERGANK QGRIGACYRV RRSYALAPPG 240 DRARGFSLLC HARRPAQLDV PNRGDTGPCL CSSSARVRLE IACIGTFLYG RGTRSRILTP 300 WSVVSHDYGG AVVGRMWSLA QCLRDGNTER AVQPAQYVPS PYCARSTRRR FTVDAGNDDR 360 LAPPVIEHAS GTNYTYQVCV HADGRPLLMV YPACSAVDVE LALLTIDRHH ASKKERNRSV 420 SPCGIMVKNA QLQAEAAING AAGNAAAARQ QQHGGKRQYK GVRMRSWGSW VSEIRAPNQK 480 TRIWLGSYST AEAAARAYDA ALLCLKGSAA DLNFPVHLPF HIPAAAMSPK SIQRVAAAAA 540 ANACSPLQQG AGPASYPAAA AAINDAASHP PCGYGVDSAS WGVSSPETVI TDHQYCETMM 600 ARDDGMMGDV DYGSLADIEA FLFQSPKCME YGMMDPCSTF FAPAPMAADW EEEGEIDLWS 660 FSSCN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-12 | 452 | 515 | 11 | 72 | Ethylene-responsive transcription factor ERF096 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3197 | 34 | 69 |