PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01428.1.g00220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 402aa    MW: 44253.6 Da    PI: 4.4679
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01428.1.g00220.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.28.7e-1440682755
                         G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                                      Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Zmw_sc01428.1.g00220.1.sm.mkhc 40 VGPKKILDLMNVPGLTRENVASHLQKYRL 68
                                    56**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.9E-61238No hitNo description
SuperFamilySSF466893.58E-83072IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-113768IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.1E-143973IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MALADATAFP YGLRVLVVDD DPTWLKILEK MLKKCSYEEV GPKKILDLMN VPGLTRENVA  60
SHLQKYRLYL SRLQKQNEER AMGSTRQDFS YKGPSDNLNL RSSFQEQPGN IASGYQNGSQ  120
KIQNQINMTD SHLEDKKVVV PLHVPDKSRT PVSDVTNSQN VTGASPLGGV LSFERMPVNQ  180
DRKPSETMIL DCQSWRGNVT PKQFMQYPKH NHDRCDLLGD YSCLPKPDLE HSTAPGPLYA  240
PPPVISVSCS MEGDATDSSD VKPGLLGCVK SLSPTPNSTV ESVSVQLSDS ATFTDGDLKL  300
SSVEGLPSIK DCYFDQTKNQ ANFLTSEEAS IIGGTDLACL ADDLSGYQLQ GVSLENIGLN  360
SIDLFQYNDA MILPGLQNNW YDDLEFSGET TDYQLIDGCL FA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817738.10.0two-component response regulator ORR26
SwissprotQ5N6V80.0ORR26_ORYSJ; Two-component response regulator ORR26
TrEMBLA0A1E5VJT10.0A0A1E5VJT1_9POAL; Two-component response regulator ORR26
STRINGPavir.Ea03527.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59003752
Publications ? help Back to Top
  1. Du L, et al.
    The two-component signal system in rice (Oryza sativa L.): a genome-wide study of cytokinin signal perception and transduction.
    Genomics, 2007. 89(6): p. 697-707
    [PMID:17408920]