PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01401.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 592aa MW: 63421 Da PI: 9.4066 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 47 | 95 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g Zmw_sc01401.1.g00030.1.am.mk 47 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 95 9****998.**********843...6***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.24E-20 | 46 | 103 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.998 | 46 | 103 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.0E-31 | 46 | 103 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.9E-36 | 46 | 109 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.5E-11 | 47 | 95 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.67E-28 | 47 | 103 | No hit | No description |
PRINTS | PR00367 | 4.9E-10 | 47 | 58 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-10 | 69 | 85 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence Send to blast |
MDDAHKPASP TSASCTSSSS SSSSSSLVGA APKKRPRDRE DLGHLTYRGV RMRSWGKWVS 60 EIREPRKKSR IWLGTFATAE MAARAHDVAA LAIKGRAAHL NFPGQAHLLP RPASAAPKDV 120 QAAAALAAAA ADFPSDANAK SPESSSSSSS DDASVSFPPP PPPLQREDAL PDPDESLFDL 180 PDLLFDLRCG PSSCGASWAV DDDVAGGAAF RLEEPLMKKK RKEKGHHITR LPSHGRGFER 240 EGHPVSLSLS DSEQTPPPAH HTTQQERSYN LPTPLDQTSS SAGDVRRGRV ERVVVAADRS 300 ANRALKGRES DGCRSSDAPL RSLARRAAGF HAPWPPCRPL RTPRAHENGR KPTPRVACRL 360 AFVHGTLCPS PLCADAMLPG EDTRRGKLLF RSPQGQDDDD SWRLRDPDWP QPRLPRTETQ 420 SDREIAASSI PIGLLTRGYR NLIAAGRNLA NPNAGKITLT HAAATDLPGR SVSWSAGHSC 480 ADDGVKNCVL APPAGHCCGS PGVLRLVTSV TCWAKPLSEV SPTKSTRQAE TRQTDARAPG 540 WRACASQSWW YGDTDHVVRA LHTAGFGRTR PALEHSYASA VPVPGAGTLT SI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-16 | 44 | 108 | 12 | 77 | Ethylene-responsive transcription factor ERF096 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP159 | 35 | 354 |