PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01382.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family YABBY
Protein Properties Length: 204aa    MW: 22745.4 Da    PI: 8.8811
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01382.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY50.49.2e-16162155
                         YABBY  1 advfssseqvCyvqCnfCntilav.......svPstslfkvvtvrCGhCtsllsvnlakasq 55
                                  +d++  se++Cyv+C+fCnt+lav        vP + l+ +vtv+CGhC +l  ++l+  + 
  Zmw_sc01382.1.g00110.1.sm.mk  1 MDLVAPSEHLCYVRCTFCNTVLAViwtigpvGVPCKRLMDTVTVKCGHCNNLSYLSLRPPTV 62
                                  578899****************9644433337*******************98887776555 PP
2YABBY90.35.1e-2892152102162
                         YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                                   s    e ++rvp v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  Zmw_sc01382.1.g00110.1.sm.mk  92 SPTPAEVSARVPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 152
                                   4455677889999***********************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046901.8E-436153IPR006780YABBY protein
SuperFamilySSF470951.31E-895154IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.102.0E-5107154IPR009071High mobility group box domain
CDDcd013901.80E-5114155No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010254Biological Processnectary development
GO:0010582Biological Processfloral meristem determinacy
GO:0048479Biological Processstyle development
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDLVAPSEHL CYVRCTFCNT VLAVIWTIGP VGVPCKRLMD TVTVKCGHCN NLSYLSLRPP  60
TVQPPSPTDH PLGPFQGHCN DCRRNQPLPL ASPTPAEVSA RVPFVVKPPE KKHRLPSAYN  120
RFMREEIQRI KAAKPDIPHR EAFSMAAKNW AKCDPRCSTA VSTATSTSAP EPRVVSAPQM  180
LLQERAKEQV VESFDIFKQM ERSI
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00220DAPTransfer from AT1G69180Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021307124.11e-119protein DROOPING LEAF isoform X1
SwissprotQ76EJ01e-111YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A3L6TQ501e-121A0A3L6TQ50_PANMI; Protein DROOPING LEAF isoform X1
STRINGPavir.Ia04690.1.p1e-120(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59513657