PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc01357.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 185aa MW: 19885.9 Da PI: 8.7519 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 74.7 | 1.3e-23 | 14 | 58 | 2 | 46 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ Zmw_sc01357.1.g00150.1.sm.mk 14 PRMRWTSTLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHM 58 9*****************************************996 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.2E-9 | 11 | 57 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.5E-19 | 12 | 58 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-15 | 14 | 57 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence Send to blast |
MPRLPASRRG MRAPRMRWTS TLHSRFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHMYR 60 TVKSTDKPAT FSGPIDGGGS GDEDLQNAEQ AQSAGDINRQ PFAAHQSASS EGATSQAGGG 120 DLECSSADDS DGSRARSTSS RMSQNLADQL ACSRYPTKKW EALAWSSRWG DQTGTGKNMT 180 SSAKN |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015696540.1 | 4e-56 | PREDICTED: probable transcription factor RL9 | ||||
TrEMBL | A0A3L6RKZ8 | 4e-55 | A0A3L6RKZ8_PANMI; Putative transcription factor RL9 | ||||
STRING | Pavir.Fb00812.1.p | 4e-62 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP33646 | 3 | 4 |