PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01350.1.g00210.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 397aa MW: 42007.3 Da PI: 5.0841

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01350.1.g00210.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49	1.3e-15	323	376	6	60
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 r+rr++kNRe+A rsR+RK+a++ eLe + L++eN++L+ e e +k+v++ + Zmw_sc01350.1.g00210.1.sm.mk 323 RQRRMIKNRESAARSRARKQAYTVELEAELNHLKEENERLRAE-ELVEKMVEQSR 376 9****************************************55.77788888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-13	318	377	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.852	320	365	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.6E-14	323	380	No hit	No description
CDD	cd14707	2.06E-23	323	363	No hit	No description
Pfam	PF00170	1.3E-11	323	377	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.69E-10	323	365	No hit	No description
PROSITE pattern	PS00036	0	325	340	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009409	Biological Process	response to cold
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009737	Biological Process	response to abscisic acid
GO:0010152	Biological Process	pollen maturation
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
MASETSKNMK ALDEQEVTSH QRGQSFRAGS SADAGELAAD PLARQSSIMS LTLEELLNSL 60 CEPGRNFESM NMEEFVANIW NAEEFQAATG GRKEDVEEGP MATGTGEGGG VGGGSGLCRQ 120 GSFSLPPPLS LKTVEEVWAE ISQGPSGAQP HAAPQQAVVQ PQVGCGGVAA SGRQVTLGEM 180 TLEDFLVKAG VVRGSLAGQG QGQAAAAVGM VPAGPMIHMQ QGQLAAPMMF QVAPPPANAV 240 YPVMGDTMGY HNGYPGGMTV VPPPPPSQCV AAAVSPGSSD GISAMTQAEM MTCIGNGGMV 300 RNGNARKRES PEDECTEKTV EPRQRRMIKN RESAARSRAR KQAYTVELEA ELNHLKEENE 360 RLRAEELVEK MVEQSRENVS AKKKSGRGMR RCGSSMW

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

MASETSKNMK ALDEQEVTSH QRGQSFRAGS SADAGELAAD PLARQSSIMS LTLEELLNSL  60
CEPGRNFESM NMEEFVANIW NAEEFQAATG GRKEDVEEGP MATGTGEGGG VGGGSGLCRQ  120
GSFSLPPPLS LKTVEEVWAE ISQGPSGAQP HAAPQQAVVQ PQVGCGGVAA SGRQVTLGEM  180
TLEDFLVKAG VVRGSLAGQG QGQAAAAVGM VPAGPMIHMQ QGQLAAPMMF QVAPPPANAV  240
YPVMGDTMGY HNGYPGGMTV VPPPPPSQCV AAAVSPGSSD GISAMTQAEM MTCIGNGGMV  300
RNGNARKRES PEDECTEKTV EPRQRRMIKN RESAARSRAR KQAYTVELEA ELNHLKEENE  360
RLRAEELVEK MVEQSRENVS AKKKSGRGMR RCGSSMW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	114	TGEGGGVGGGS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269\|PubMed:17604002, ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001296980.1	0.0	protein ABSCISIC ACID-INSENSITIVE 5
Swissprot	Q8RZ35	1e-155	ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBL	K3XIK9	0.0	K3XIK9_SETIT; Uncharacterized protein
STRING	Si001731m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3830	35	58

Publications ? help Back to Top
Zou M,Guan Y,Ren H,Zhang F,Chen F A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance. Plant Mol. Biol., 2008. 66(6): p. 675-83 [PMID:18236009] Kim H, et al. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J. Exp. Bot., 2012. 63(2): p. 1013-24 [PMID:22071266] Bhatnagar N, et al. The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10. Plant Mol. Biol., 2017. 93(4-5): p. 389-401 [PMID:28000033]