PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01332.1.g00290.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 304aa MW: 33236.4 Da PI: 4.4824

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01332.1.g00290.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	2.9e-11	145	195	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++ rr ++NR +A +sR+RKk +++eLe+k+k Leae ++L l+ + e Zmw_sc01332.1.g00290.1.am.mkhc 145 RKKRRQMRNRDSAMKSRERKKIYVKELETKSKYLEAECRRLSYALQCYAAE 195 6899**********************************9999877766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.8E-5	140	205	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.852	143	206	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-12	145	204	No hit	No description
Pfam	PF00170	3.0E-9	145	201	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.63E-11	145	203	No hit	No description
CDD	cd14704	1.44E-14	146	197	No hit	No description
PROSITE pattern	PS00036	0	148	163	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010200	Biological Process	response to chitin
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response
GO:0005634	Cellular Component	nucleus
GO:0005789	Cellular Component	endoplasmic reticulum membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MDADFFADID FAALLASFSE EPAAVSDLIV PSPPPSSPPP ARDGEAGSPE SVTSRSGPPA 60 EEALSEIERF LMTEGDAEAA GALEGVSVEE FFDALYDGGE AEREEEKEKK ESEAGASTDE 120 GSGKEEEVVT ADAEKEVDGD DLVSRKKRRQ MRNRDSAMKS RERKKIYVKE LETKSKYLEA 180 ECRRLSYALQ CYAAENMVLR QSLLKDRPGV APTAMQESAV LTETLPMVSL LWLVSIVCLF 240 LMPGLPNPSP AAPRRSGRDP AMVARKTSYE NPDTLDLILH GRRCKGTRAK IKLDTFPFHA 300 ADAC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269\|PubMed:21223397, ECO:0000269\|PubMed:22050533, ECO:0000269\|PubMed:22199238}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00019	PBM	Transfer from AT1G42990	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269\|PubMed:21223397, ECO:0000269\|PubMed:22050533}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004965858.1	1e-148	bZIP transcription factor 50
Swissprot	Q69XV0	1e-102	BZP50_ORYSJ; bZIP transcription factor 50
TrEMBL	A0A0C5KQY6	1e-157	A0A0C5KQY6_ELECO; BZIP transcription factor
STRING	Si006978m	1e-147	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6934	37	50

Publications ? help Back to Top
Wakasa Y, et al. Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm. Plant J., 2011. 65(5): p. 675-89 [PMID:21223397] Lu SJ, et al. Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses. Mol Plant, 2012. 5(2): p. 504-14 [PMID:22199238]