PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01263.1.g00210.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NF-X1
Protein Properties Length: 800aa    MW: 87142 Da    PI: 7.9144
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01263.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X118.64.1e-06253270118
                      zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                                   CG+H+C+  CH+GpC++C
  Zmw_sc01263.1.g00210.1.sm.mk 253 CGNHSCKDMCHPGPCGEC 270
                                   ****************** PP
2zf-NF-X122.23.1e-07311328118
                      zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                                   CG H+C+ +CHeG+CppC
  Zmw_sc01263.1.g00210.1.sm.mk 311 CGVHRCKVTCHEGECPPC 328
                                   ****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578502.33E-61082No hitNo description
PROSITE profilePS500168.761678IPR019787Zinc finger, PHD-finger
PROSITE profilePS500899.4061976IPR001841Zinc finger, RING-type
PROSITE patternPS0135901975IPR019786Zinc finger, PHD-type, conserved site
CDDcd060083.79E-5109172No hitNo description
SMARTSM004380.023134152IPR000967Zinc finger, NF-X1-type
PfamPF014225.8136151IPR000967Zinc finger, NF-X1-type
CDDcd060085.46E-13179227No hitNo description
PfamPF014226.6E-4189206IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0022189208IPR000967Zinc finger, NF-X1-type
CDDcd060083.67E-10243286No hitNo description
PfamPF014226.8E-4253270IPR000967Zinc finger, NF-X1-type
SMARTSM004383.5E-4253272IPR000967Zinc finger, NF-X1-type
CDDcd060085.46E-14301349No hitNo description
PfamPF014224.1E-6311328IPR000967Zinc finger, NF-X1-type
SMARTSM004381.3E-4311330IPR000967Zinc finger, NF-X1-type
PfamPF0142229405413IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 800 aa     Download sequence    Send to blast
MPQLVQEIQD KLARGAVECM ICYDMVRRSA PIWSCGSCYS IFHLPCIRKW ARSPASVADA  60
SPEATASASW RCPGCQTVMS TPARDLSYTC FCGRRREPPN DLFLTPHSCG EPCSKPLEKV  120
DPGVKGEDAD ATRCPHVCVL QCHPGPCPPC KAFAPDRRCP CGKQIIVRRC ADRSTPVTCG  180
QPCERLLPCG RHHCEKVCHT GPCGDCAVLI SAQCFCGKKK EALLCGDMMV KGKLSEEKGV  240
FSCSEVCGHT LTCGNHSCKD MCHPGPCGEC ELMPRKVTTC HCGKTRLQEI RASCLDPIPT  300
CDKVCDKKLP CGVHRCKVTC HEGECPPCLV RVEQRCRCSS SSRMLECYKV SKEEFLCNKP  360
CGRKKNCGRH RCSECCCPLS KPLAQHEGSD WDPHLCQLTC GKKLRTCHPA PCDQPPADGD  420
ASSSSGGNAS CGQKLPMPLQ PVESNGRRVP LGQRKLSCDE ECAKMEKKRV LAEAFDITPP  480
NLDALHFGEN SSASDLVSDL FRREPKWVMA IEERCKFLVL GKMRGNSSSS LKLHVFCHMM  540
KDKRDAIRLI AERWKLSVQS AGWEPKRFVT IHVTPKSKPP ARILGSKAGA PVTAAQPYFD  600
PLVDMDPRLV VAMLDLPRDA DVNALVLRFG GECELVWLND KNAVAVFNDP ARAATALRRL  660
DYGSAYQGAT MFMSNSSVQP GNVWVGTQKD GGIASKSNPW KSTASVEPSS SSGDWTGVPG  720
HTSSSGWSGV NAAALVAGTA NRWSVLETDA ATSSGRGDER MPAPHSYAAH STTTNTGDDG  780
PSVRKLQPEV EVDDWEEAYE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643844.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY591e-172NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A1E5V8G80.0A0A1E5V8G8_9POAL; NF-X1-type zinc finger protein NFXL1
STRINGevm.model.supercontig_3.3630.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61303543