PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01253.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 295aa MW: 31911.1 Da PI: 6.1806

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01253.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.3	1.4e-12	96	120	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LHerFv+av+qLGG+e Zmw_sc01253.1.g00110.1.sm.mk 96 KPRLRWTADLHERFVDAVAQLGGPE 120 79*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.2E-11	93	121	IPR009057	Homeodomain-like
Pfam	PF14379	7.2E-20	168	213	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MGAFQLQPPD QLESFTLHEK GSKNKQEERE RKGDKAEGLF VGGVDPSLLR EREEQQEEMF 60 PPGLIHHRPD GPAPGDAPPR SGPGGGPSLV LTADPKPRLR WTADLHERFV DAVAQLGGPE 120 SERLPLHPSN ARSLAGASIG LLVGLPRVDS CPARPIVASL LLERGSQEVK EALRAQMEVQ 180 RRLHEQVEVQ KRVQIRMDAL QKYIDGILEN ACKLVTEQFA SSSFSISDPA DLPELSPGGG 240 GVMCGPNDTM RSSVFNQLAV SSMDSHSPGG KPSPSGIEGP PLLLQKSPEL RRRSS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025804279.1	1e-109	protein PHR1-LIKE 2-like
TrEMBL	A0A2T8KPV9	1e-107	A0A2T8KPV9_9POAL; Uncharacterized protein
STRING	Si030441m	1e-105	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3427	38	73