PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01253.1.g00100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 254aa    MW: 27915.5 Da    PI: 6.4389
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01253.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.14.4e-144684139
                         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39
                                    ++rlrWt++LHerFveav+qLGG++k   ++i e++k++
  Zmw_sc01253.1.g00100.1.sm.mkhc 46 RQRLRWTNDLHERFVEAVTQLGGPDKIQASKISEALKLQ 84
                                    58************************9999999988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.55E-54581IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.5E-124583IPR009057Homeodomain-like
TIGRFAMsTIGR015578.0E-104783IPR006447Myb domain, plants
PfamPF143791.3E-2376120IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MHSTKPEASF GQAHTDSVIN QQQMVLAGND MGPSNGANSN TNMAARQRLR WTNDLHERFV  60
EAVTQLGGPD KIQASKISEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLEKIIEEQR  120
RFSGVKPEMP LAGASVTVSS NEQFPDSERT EPSTPAPKSE SPTQGASNRD NGGRTEAPKS  180
PSHDDSLSHH EPLTPDSNHQ PGSPTASPNH ERAAKRQRAS STEFSQGDCS LTGHIFESSS  240
GSEFQQYSMS YSGH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001152613.11e-107MYB-CC type transfactor
RefseqXP_023156307.11e-107MYB-CC type transfactor isoform X1
SwissprotQ9SJW08e-40PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1D6I1M91e-122A0A1D6I1M9_MAIZE; Myb family transcription factor PHL7
STRINGGRMZM2G173943_P021e-106(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896