PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01253.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 249aa MW: 27527.4 Da PI: 10.402 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.1 | 1.9e-13 | 120 | 163 | 3 | 46 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 e +r rrk++NRe+ArrsR+RK++ ++ L v +L+ +Nk+L Zmw_sc01253.1.g00020.1.am.mk 120 ENRRKRRKESNRESARRSRLRKQQHLDGLNSQVNQLTDQNKQLG 163 5689*************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.5E-11 | 115 | 163 | No hit | No description |
SMART | SM00338 | 1.3E-12 | 118 | 182 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 120 | 162 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-10 | 120 | 162 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-10 | 122 | 171 | No hit | No description |
CDD | cd14702 | 2.64E-17 | 123 | 171 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 125 | 140 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MLPREPWLLT CVAAARSTHN ASLPPRGKQQ RTAHVSFFCA ILLSLREPGS SKRFSLCDFF 60 FLKFMLLLAL SEHLLLGGSS MIGSSITRLV QSFSVVFLHC LGTGSSRSSE DGVNLQAQME 120 NRRKRRKESN RESARRSRLR KQQHLDGLNS QVNQLTDQNK QLGVALRVTS QNLVAVQAQN 180 SVLQTQKLEL ESRLGSLADF LLCLNPGTTA STGSAANSAV MNDSLMTTTS GACTWSQPVD 240 LYHHHHQCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 127 | RKRRKE |
2 | 134 | 140 | RRSRLRK |
3 | 134 | 141 | RRSRLRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003577967.1 | 2e-50 | bZIP transcription factor 44 | ||||
TrEMBL | A0A0A9GYA3 | 1e-52 | A0A0A9GYA3_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Ba02250.1.p | 3e-52 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3740 | 32 | 76 |