PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01251.1.g00060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 416aa MW: 45070.9 Da PI: 8.9323 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160 | 9.6e-50 | 40 | 165 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++PwdLp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgy Zmw_sc01251.1.g00060.1.sm.mk 40 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWDLPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGY 119 79***************************.89***************8778899*************************** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg d+ + +++++ +glkktLvfy+g+apkg++++W+m+eyrl Zmw_sc01251.1.g00060.1.sm.mk 120 WKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 165 ********************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.29E-54 | 39 | 201 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.129 | 39 | 202 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-24 | 41 | 165 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MSSGRLENGH SAAAPAVEGG GGGGRGGEGG GDSHEDDLVM PGFRFHPTEE ELIEFYLRRK 60 VEGKRFNVEL ITFLDLYRYD PWDLPALAAI GEKEWFFYVP RDRKYRNGDR PNRVTASGYW 120 KATGADRMIR AENNRPIGLK KTLVFYSGKA PKGVRSSWIM NEYRLPPDDT DRYNKLPHGR 180 ISLCSEQFVI RTEISLCRVY KRSGIDDGHG SRPSSARSTP SSGATAQRDT NKQAASSSST 240 PTPTPPATPS KLHLLHGECT SPLAIADHAR GHKAPSAPRQ QKPSSAYLSA TSASADGDHQ 300 HEGTAATPYE HPRNTNPFAS TYSLLSLVNA AAMGTSSAAA IDELSTVVGH GSPSTAYFNH 360 HQQAGGHSHF LSLPTAPPSS QPALSVSLQA AISDKIWEWN TIPDAAGRDY SSARFK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-51 | 41 | 203 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-51 | 41 | 203 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-51 | 41 | 203 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-51 | 41 | 203 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-51 | 41 | 203 | 19 | 166 | NAC domain-containing protein 19 |
4dul_B | 2e-51 | 41 | 203 | 19 | 166 | NAC domain-containing protein 19 |
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Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 22 | 30 | GGRGGEGGG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004970843.1 | 1e-170 | NAC domain-containing protein 35 | ||||
TrEMBL | A0A1E5WH59 | 1e-172 | A0A1E5WH59_9POAL; NAC domain-containing protein 35 | ||||
STRING | Si001651m | 1e-169 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2826 | 37 | 87 |