PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01239.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 313aa    MW: 32933.2 Da    PI: 7.7556
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01239.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.2e-13238271134
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                                     e+elk+errkq+NRe+ArrsR+RK++e+eeL++k
  Zmw_sc01239.1.g00080.1.sm.mkhc 238 ERELKKERRKQSNRESARRSRLRKQQECEELAQK 271
                                     89******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-11233271No hitNo description
PfamPF001701.1E-10238271IPR004827Basic-leucine zipper domain
SMARTSM003387.0E-10238302IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.898240271IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-7241276No hitNo description
CDDcd147021.56E-14243271No hitNo description
PROSITE patternPS000360245260IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAPSTSTSGD ERPAGVPRDP TSVAVPGPQT HAEWAASMQA YYAAAQQHMV AAAATAGAPY  60
GGAPMPFPIY HPAYYAHASV PTGVPYTAGD AATMMEGNSK MKSPCAPSGD GSSRSVRSSD  120
GGSEETSDRR DNARADLKVL PSAKRRKPSN ANVKGESSQA GTKQDAAAGF PFVAEGSSAS  180
KLSVPTPEKA AVSDAPPNLN IGMDIWGRPP SKTETSEQGE VNAGVPSQHA GALSQMDERE  240
LKKERRKQSN RESARRSRLR KQQECEELAQ KDEMEHDEGK GGVSTALSIQ NDTSKVHPGN  300
KGHLHKNNDD SKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1254260RRSRLRK
2254261RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317833.19e-89DNA-binding protein EMBP-1 isoform X2
SwissprotP250323e-33EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A368SCZ71e-90A0A368SCZ7_SETIT; Uncharacterized protein
STRINGPavir.J02462.1.p2e-73(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692