PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01217.1.g00200.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 347aa MW: 38047.4 Da PI: 11.7804

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01217.1.g00200.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.7	6.8e-15	190	250	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++k +r+ +NR++A+ R+R+ka+++ Le kvk Le++N+++ ++l++l++e + l+++v Zmw_sc01217.1.g00200.1.am.mk 190 ADKEHKRLKRNRVSAQQARERRKAYLADLEVKVKDLEKKNSEMEEKLSTLQNENQMLRQDV 250 7899***************************************************999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-12	188	252	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.2E-13	190	250	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.656	190	253	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.75E-11	192	248	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.0E-14	192	250	No hit	No description
CDD	cd14704	1.47E-16	195	244	No hit	No description
PROSITE pattern	PS00036	0	195	210	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence Send to blast
LSVSAAGARG PERVHVPQHR ALGWRPRTGG LRGGHDGGFP AVDLRRLDGW AVAAKTPNPQ 60 LRVGAINAVA AIWFTVEAPS MFRNSRADPM AFVPASHVKY RRMQEQAASS LPSSSERSSS 120 SAHHMEMDLK EGKRLRMESD EEIRRVPELG LELPSGPSTS GREAGGAERA QASSAAAAQS 180 GGRRRLRTPA DKEHKRLKRN RVSAQQARER RKAYLADLEV KVKDLEKKNS EMEEKLSTLQ 240 NENQMLRQDV QLIHHRPRFV LDVSGARPRI DLPTLGAVGG RSCRLTRPPP PVSFPLVLIP 300 SDSKTVTSRG RTVFWRAASL ACVRSVARRS LLSARAASGC TIPRLSL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence Send to blast

LSVSAAGARG PERVHVPQHR ALGWRPRTGG LRGGHDGGFP AVDLRRLDGW AVAAKTPNPQ  60
LRVGAINAVA AIWFTVEAPS MFRNSRADPM AFVPASHVKY RRMQEQAASS LPSSSERSSS  120
SAHHMEMDLK EGKRLRMESD EEIRRVPELG LELPSGPSTS GREAGGAERA QASSAAAAQS  180
GGRRRLRTPA DKEHKRLKRN RVSAQQARER RKAYLADLEV KVKDLEKKNS EMEEKLSTLQ  240
NENQMLRQDV QLIHHRPRFV LDVSGARPRI DLPTLGAVGG RSCRLTRPPP PVSFPLVLIP  300
SDSKTVTSRG RTVFWRAASL ACVRSVARRS LLSARAASGC TIPRLSL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1408	38	111