PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01205.1.g00180.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 515aa    MW: 56626.3 Da    PI: 10.7492
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01205.1.g00180.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.91.7e-3192145255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  Zmw_sc01205.1.g00180.1.sm.mk  92 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 145
                                   8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.60188148IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.9E-2988146IPR009057Homeodomain-like
SuperFamilySSF466895.02E-1491146IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-2292147IPR006447Myb domain, plants
PfamPF002498.9E-993144IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MMRRDLRGTL YHLWYWTSTR ASPRGARKER SATTTATRRQ MMTEVAQAKS SSNNSSTNHN  60
SGSNKDHDSS SKAEGSGEGV PTVRQYNRSK LPRLRWTPDL HMAFVHAVER LGGQERATPK  120
LVLQMMNVRG LSIAHVKSHL QMYRSKKLDH ETGHERAAGI SSVFSPMDFR MRRGDPRFRD  180
MFLPREPGSA LSSSLLQNSG FFGSRNGVSP DASRIYGLFQ HRQPTMRTFD FKNYSSLRNQ  240
ELMFNHHAAT TRVGAITDHG PAKGLIHNMI FRKDGKPTSH LFDVRDAIAS NPSAVAGAAN  300
RSSNWDGSSP RPLSRTISAS SSTGFALENH HFLSRRRCAG GSNGYHFDTN TTSSDPVVTS  360
EALGTRLEKN LEPKSPNKVI DEMHTATGTK RPKTSKEVNG WAPDLQLSLS PNEGAEAEKA  420
KKRKVALSEQ EVDTDKMPPL SLSLSLRGGD SGGEGSGGDA RRLEAEIGSS SKAAALGLST  480
LDLTMSIKAL ESMLFHNHKQ HNYTSALNFS NGISH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-1893145355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1893145355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1893145355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1893145355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-1893145456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812252.10.0uncharacterized protein LOC112889712
TrEMBLA0A2T7DXS00.0A0A2T7DXS0_9POAL; Uncharacterized protein
STRINGPavir.Db01175.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686