PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01205.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 352aa MW: 37109.8 Da PI: 7.7963

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01205.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	207.5	3.6e-64	12	160	2	148
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..ee 78 g+ r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+ Zmw_sc01205.1.g00010.1.sm.mkhc 12 GGARVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPaaER 90 688**********************************************************************9999 PP DUF822 79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 ++ +g+sas sp+ss+q +sp +sy++sp+sssfps+ s+++++l + +sl+p+l++ls+++s Zmw_sc01205.1.g00010.1.sm.mkhc 91 HDPIGQSASPSPCSSYQ--------PSPQASYNPSPASSSFPSSGSSSHLTLGGNnfiggvegSSLIPWLKNLSSSPS 160 *************........88999999999999999999888888887788888888*******998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.8E-69	12	156	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MTTGGGGGGG LGGARVPTWR ERENNRRRER RRRAIAAKIF AGLRAYGNYN LPKHCDNNEV 60 LKALCNEAGW TVEPDGTTYR KGCKPPAAER HDPIGQSASP SPCSSYQPSP QASYNPSPAS 120 SSFPSSGSSS HLTLGGNNFI GGVEGSSLIP WLKNLSSSPS FASSPKFTQI QHLYFNGGSI 180 SAPVTPPSSS PTRTPRFKTD WENPSVQPPW AGENYASLPN STPPSPGRQV APDPAWLAGF 240 QISSAGPSSP TYNLVAPNPF GIFRETVASS SRMCTPGQSG TCSPVMGGVP AHHDVQMSDG 300 APDDFAFGSS SNGNNESSGL VKAWEGERIH EECVSDELEL TLGSSKTRAD PS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MTTGGGGGGG LGGARVPTWR ERENNRRRER RRRAIAAKIF AGLRAYGNYN LPKHCDNNEV  60
LKALCNEAGW TVEPDGTTYR KGCKPPAAER HDPIGQSASP SPCSSYQPSP QASYNPSPAS  120
SSFPSSGSSS HLTLGGNNFI GGVEGSSLIP WLKNLSSSPS FASSPKFTQI QHLYFNGGSI  180
SAPVTPPSSS PTRTPRFKTD WENPSVQPPW AGENYASLPN STPPSPGRQV APDPAWLAGF  240
QISSAGPSSP TYNLVAPNPF GIFRETVASS SRMCTPGQSG TCSPVMGGVP AHHDVQMSDG  300
APDDFAFGSS SNGNNESSGL VKAWEGERIH EECVSDELEL TLGSSKTRAD PS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	4e-24	15	85	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	4e-24	15	85	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	4e-24	15	85	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	4e-24	15	85	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025813584.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	0.0	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A1E5VA88	0.0	A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRING	Pavir.J12085.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]