PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01191.1.g00100.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 698aa MW: 76069 Da PI: 10.4379

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01191.1.g00100.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	81.9	6.4e-26	502	562	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+r++edp+ ++++Y g+H++ Zmw_sc01191.1.g00100.1.am.mk 502 VDDGHSWRKYGQKDILGAKHPRGYYRCTHRhtqGCAATKQVQRTDEDPERFDVIYLGTHTC 562 59*************************98999***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	21.586	497	560	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.6E-26	498	563	IPR003657	WRKY domain
SuperFamily	SSF118290	3.79E-24	499	562	IPR003657	WRKY domain
SMART	SM00774	3.5E-37	502	564	IPR003657	WRKY domain
Pfam	PF03106	2.4E-25	503	562	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence Send to blast
MPYRTRLRGC SSGSASARMH VAITNSTLGD RFPTREIPIA IAPATLRSSV HDADRNRQPS 60 SLRESSNPAY MSAKFTREVL PGKFREVDEP SADSSGRQGL TSMDSMKGLP RPRVSSVRLQ 120 LVVAARGSAS PPGRKIPRPC FHTPRRIWWR VDRLRERASL GVPHMQAREL FSPVALHMAK 180 LAVAPRAARP RPAGYVQRTS LVSTCRLHNQ KNGAKALPAS CSSLAAWGRV ELCRGISTPS 240 QLPRCFADGS PTYEPMTNSL SANNFIPLQR NEHLFRSSPT AARETSFSIK RDRKKSCDDR 300 KVAGHDRCTH TWVPTATLIA PSINCLPRSP TRLPLSANYP ATGRQQPKHI NTKQARPSKK 360 EAPLSANYPT TGHNLFFLLA TETRGGSRLV VMELSHIKEL LTQLEVHLGD SPELCKRLAS 420 QIFSLTERSI GIITSSSSGF DGGRKRSAED AGLGSATPSP LSDVVVDAPF KNNKKRKMME 480 KRKHQVRVSP AAAGGGGETT PVDDGHSWRK YGQKDILGAK HPRGYYRCTH RHTQGCAATK 540 QVQRTDEDPE RFDVIYLGTH TCVHKPAAGQ VAQATQPPEH NPDAHSLLQN LSASLTVKTE 600 GLAVAGEPQG WSASTPFRFS STPLAPERRS LVSVPSTSEN WGVSPATSDS NHVASFHPFD 660 GAAGEAELQE VVAASALAAP FLDIDEDFLN IDISSYFA

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence Send to blast

MPYRTRLRGC SSGSASARMH VAITNSTLGD RFPTREIPIA IAPATLRSSV HDADRNRQPS  60
SLRESSNPAY MSAKFTREVL PGKFREVDEP SADSSGRQGL TSMDSMKGLP RPRVSSVRLQ  120
LVVAARGSAS PPGRKIPRPC FHTPRRIWWR VDRLRERASL GVPHMQAREL FSPVALHMAK  180
LAVAPRAARP RPAGYVQRTS LVSTCRLHNQ KNGAKALPAS CSSLAAWGRV ELCRGISTPS  240
QLPRCFADGS PTYEPMTNSL SANNFIPLQR NEHLFRSSPT AARETSFSIK RDRKKSCDDR  300
KVAGHDRCTH TWVPTATLIA PSINCLPRSP TRLPLSANYP ATGRQQPKHI NTKQARPSKK  360
EAPLSANYPT TGHNLFFLLA TETRGGSRLV VMELSHIKEL LTQLEVHLGD SPELCKRLAS  420
QIFSLTERSI GIITSSSSGF DGGRKRSAED AGLGSATPSP LSDVVVDAPF KNNKKRKMME  480
KRKHQVRVSP AAAGGGGETT PVDDGHSWRK YGQKDILGAK HPRGYYRCTH RHTQGCAATK  540
QVQRTDEDPE RFDVIYLGTH TCVHKPAAGQ VAQATQPPEH NPDAHSLLQN LSASLTVKTE  600
GLAVAGEPQG WSASTPFRFS STPLAPERRS LVSVPSTSEN WGVSPATSDS NHVASFHPFD  660
GAAGEAELQE VVAASALAAP FLDIDEDFLN IDISSYFA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6ir8_A	1e-21	502	562	8	68	OsWRKY45

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1086	38	131