PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01184.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GRF | ||||||||
Protein Properties | Length: 257aa MW: 27393.5 Da PI: 4.553 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 70.2 | 2.5e-22 | 175 | 219 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRC+r +++++k+C+rH+hrgr+r + ++e Zmw_sc01184.1.g00070.1.sm.mkhc 175 EPEPGRCRRTDGKKWRCWRSTIPNEKYCQRHMHRGRKRPVQLVVE 219 69************************************9998875 PP | |||||||
2 | QLQ | 52.9 | 1.1e-18 | 109 | 144 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k Zmw_sc01184.1.g00070.1.sm.mkhc 109 LFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 144 6*********************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00951 | 1.0E-7 | 108 | 144 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51666 | 20.602 | 109 | 144 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 1.3E-11 | 110 | 143 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 21.796 | 175 | 219 | IPR014977 | WRC domain |
Pfam | PF08879 | 4.7E-19 | 176 | 214 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MAEEGESMNP VGGGGGGDNY PQEAAAAAAE EAAQAAVAQG GGHELAEEMA NREGAGAGED 60 DDACRDLVLI EDPEAVAVED PEEAKAAAAA LQEEMKALIA SIPDGAGALF TAMQLQELEQ 120 QSRVYQYMAA RVPVPTHLVF PIWKSVTGAS SEGAQKYPTL MGLATLCLDF GKDPEPEPGR 180 CRRTDGKKWR CWRSTIPNEK YCQRHMHRGR KRPVQLVVED DEPDSASRSK TTPGKADDKN 240 ASNKKLTVAA RAAVEST |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of cell proliferation in developing shoots and leaves (PubMed:24854713). Does not possess transactivation activity (PubMed:24854713). {ECO:0000269|PubMed:24854713}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004957654.1 | 1e-135 | growth-regulating factor 11 | ||||
Swissprot | A5HEG9 | 1e-133 | GRF10_MAIZE; GRF-interacting factor 10 | ||||
TrEMBL | K3ZW28 | 1e-133 | K3ZW28_SETIT; Uncharacterized protein | ||||
STRING | Si030809m | 1e-134 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6735 | 31 | 52 |
Publications ? help Back to Top | |||
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