PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01158.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 337aa    MW: 35531.8 Da    PI: 9.5942
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01158.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS62.77.4e-2023932887173
                          GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetge 163
                                    sP+++++  +aN aI+eav  ++++H +Dfd+s + Q +aL q La+R+ +  sl++T++++p+s     ++ +l ++ge
  Zmw_sc01158.1.g00070.1.am.mk 239 GSPCFRLALHAANVAIVEAVGDHRAIHLVDFDVSAP-QHAALVQYLADRRVPGTSLKVTAIADPSSPfaqsQTATLPAVGE 318
                                   59*******************************987.99************************998889999999****** PP

                          GRAS 164 rLakfAeelg 173
                                   rL+k+A+++g
  Zmw_sc01158.1.g00070.1.am.mk 319 RLKKLADRVG 328
                                   ******9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035142.6E-17239328IPR005202Transcription factor GRAS
PROSITE profilePS5098510.758240337IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MSCTSQVHVR VVREWHRIAV GSTCKLGGQN QAHGPSRGAA TGAQPPSGER GPDSRTKPTG  60
HLEEQPPELG HLAAPLPELR IERRPTTVAT HASEGEGRRL AVVTHARRLG RLAMAKHAGD  120
RGTSPXXXXH ASDDGGSPWP STDATGTARR GQARGRQGHL ATCPLPPSSL AIAQPSRLSP  180
VHSCRESTPL APHPDSCTPV FQPPTASPPW SHLRGHAWRW PARGEQRWPG GADCSGVDGS  240
PCFRLALHAA NVAIVEAVGD HRAIHLVDFD VSAPQHAALV QYLADRRVPG TSLKVTAIAD  300
PSSPFAQSQT ATLPAVGERL KKLADRVGNA GLDDGGS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7184422