PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01138.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 656aa    MW: 71846.3 Da    PI: 8.806
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01138.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.94.2e-493865111128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrF P+deelv++yL++kv++ +     v+ evd++++ePw+Lp  +k +++ewyfFs rd+kyatg r+nratksg
  Zmw_sc01138.1.g00130.1.am.mk 386 LPPGFRFFPSDEELVCHYLHNKVANAS----GVMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSG 462
                                   79**********************998....5789*************87788999************************* PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+ +++   + ++vg++ktLvfy+grap+g kt+Wvmhe+r+
  Zmw_sc01138.1.g00130.1.am.mk 463 YWKATGKDRIIHNPkaGLAVVGMRKTLVFYRGRAPNGIKTNWVMHEFRM 511
                                   ***********998656667***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-59381530IPR003441NAC domain
PROSITE profilePS5100557.55386530IPR003441NAC domain
PfamPF023654.6E-27387511IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    Send to blast
MYCCSSTVYV PIWVNELGTV PDLGCWAAPL VTWGGPWMGA AVQTAEHSES WGGADESARP  60
RAPSPSAIYS RLASLSATSS LPSALVSWAV RGEKPGGQGP GWDRIGSERS GLDLRSWVSI  120
HPVVRPGTEP MTVTAAKTSV GSPWMPRTWH ARRTDASVSF TRQIMGAHVY HSPASLCESL  180
RPCERARPGT GSGQCPAREV TGGSALTCRQ PFAHPTKPPF LDGIYADDRR AAYLEPTNHC  240
PVPLRLPPRP SAHVIAPGVP SRAGILPRAT SMSMRACLRE AGAFLSAWCR APQILRAHSM  300
APVTRPTDDR KRRGECDGRA RVLAFRSPRR CSALGGDREI KDEQCRPRPS ISPLACHAGE  360
TTYADRDRPT LVEQAKLASH QAILTLPPGF RFFPSDEELV CHYLHNKVAN ASGVMVEVDL  420
HTHEPWELPD VAKLSTNEWY FFSFRDRKYA TGLRTNRATK SGYWKATGKD RIIHNPKAGL  480
AVVGMRKTLV FYRGRAPNGI KTNWVMHEFR MENPHTPPKE DWVLCRVFYK KKADALDYSM  540
DNEQEIALAR SAVASGKYSS SSGPGYSPPF PSLGSTHYQL PPSSDHHSSL IDFSAMALLQ  600
HNSIFDFHAH QPLNSGSSVL AATGGSRDGG EQCGGGTLMD LGLEEEHYSY NSMLQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-4538453518172NAC domain-containing protein 19
3swm_B3e-4538453518172NAC domain-containing protein 19
3swm_C3e-4538453518172NAC domain-containing protein 19
3swm_D3e-4538453518172NAC domain-containing protein 19
3swp_A3e-4538453518172NAC domain-containing protein 19
3swp_B3e-4538453518172NAC domain-containing protein 19
3swp_C3e-4538453518172NAC domain-containing protein 19
3swp_D3e-4538453518172NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166