PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01136.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 559aa MW: 61197.9 Da PI: 8.0026

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01136.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.8	4.3e-12	106	134	2	31
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPkt 31 prlrWtp+LH +Fv+ave+LGG+e +Pk+ Zmw_sc01136.1.g00010.1.am.mk 106 PRLRWTPDLHMAFVHAVERLGGQE-NVPKQ 134 8*******************9998.58886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.7E-10	102	134	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence Send to blast
MMMRGVTDHK QVLQVLDDEE EIRSMGNNAL DLNVDVVSEE GEVGDDDDED DGDGGSTTDA 60 AGSRSSSNNS STNKDSESKK GCGGEEEGSG EKRVPSVRPY NRSKLPRLRW TPDLHMAFVH 120 AVERLGGQEN VPKQEARPGW SPEGSMHSPM DFHFMRGERG FHGLSFLQRA AALSSSGPEH 180 GGFFASRNGG RPDVRRIYGL LQHHRQPQMR SFDFRSSSFR RHERALNQWE EVITRKEVFK 240 PPSTSRPQPH RPLAPSPASI NSERRWWPFA DAGAAVAGEH TRVDTGQGAN FESSFGSNSR 300 PLSWVVSGDL HLPFRWRPGS GGSHVSNNTA MIRKPSDPVV IDEAPDDAQQ LERQEYVEPM 360 RGACRKRPLP EAQDSTAPDL QLSLSHSPTA AVDDAKKRKT AAAAGEQEVI HSSELSISLS 420 LWPPAAASMQ LQHPPREKTR GSSGSGEAVL GQSTLDLTMS IRALDPQLAE QPKSEHPSGP 480 TGSLQRGPSI RPFQSAAAGA KSLSHLARTP RDRIPNQKHL LPLSLPPALI NHLTRSPLPS 540 SPPHFHSPRS PPVHSRRRA

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence Send to blast

MMMRGVTDHK QVLQVLDDEE EIRSMGNNAL DLNVDVVSEE GEVGDDDDED DGDGGSTTDA  60
AGSRSSSNNS STNKDSESKK GCGGEEEGSG EKRVPSVRPY NRSKLPRLRW TPDLHMAFVH  120
AVERLGGQEN VPKQEARPGW SPEGSMHSPM DFHFMRGERG FHGLSFLQRA AALSSSGPEH  180
GGFFASRNGG RPDVRRIYGL LQHHRQPQMR SFDFRSSSFR RHERALNQWE EVITRKEVFK  240
PPSTSRPQPH RPLAPSPASI NSERRWWPFA DAGAAVAGEH TRVDTGQGAN FESSFGSNSR  300
PLSWVVSGDL HLPFRWRPGS GGSHVSNNTA MIRKPSDPVV IDEAPDDAQQ LERQEYVEPM  360
RGACRKRPLP EAQDSTAPDL QLSLSHSPTA AVDDAKKRKT AAAAGEQEVI HSSELSISLS  420
LWPPAAASMQ LQHPPREKTR GSSGSGEAVL GQSTLDLTMS IRALDPQLAE QPKSEHPSGP  480
TGSLQRGPSI RPFQSAAAGA KSLSHLARTP RDRIPNQKHL LPLSLPPALI NHLTRSPLPS  540
SPPHFHSPRS PPVHSRRRA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824409.1	1e-128	uncharacterized protein LOC112899951 isoform X1
TrEMBL	A0A2S3GN02	1e-127	A0A2S3GN02_9POAL; Uncharacterized protein
STRING	Si016955m	1e-123	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86