PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01105.1.g00110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 416aa MW: 43583.3 Da PI: 4.8724 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.1 | 1.9e-13 | 225 | 275 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + +rrkq+NRe+ArrsR RK a + eLe v++L eN++L +l +++ Zmw_sc01105.1.g00110.1.sm.mkhc 225 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQK 275 679**************************************9888766655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-15 | 221 | 285 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 223 | 277 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.4E-10 | 224 | 277 | No hit | No description |
Pfam | PF00170 | 2.3E-10 | 225 | 273 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-9 | 225 | 274 | No hit | No description |
Pfam | PF12498 | 3.6E-49 | 292 | 409 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MERVFSVEEI PNPYWAPQQP QAPATGAAAA PVGGGGGPGG QGGGAAVDGA GAMNRCPSEW 60 YFQKFLEEAV LDSPGPGTSA GRGLGGVDAV ETKPPVGTPG ATSSAAVDPM EYNAMLKQKL 120 EKDLAAVAMW RASSAMPPER SAAAPSLPNV EVSHVGSLNS IGGNGILVQS KPADRPSGGL 180 GLQVVQNVDA IVKQATSSSS REQSDDDDME GEAETTGNGN PVQQRLQRRK QSNRESARRS 240 RSRKAAHLNE LEAQVAQLRV ENSSLLRRLA DVNQKFNDAA VDNRVLKADV ETLRAKVKMA 300 EDSVKRVTGM NALFPAVSDM SSLSMPFQGS PSDSTSDAAA PLQDDPNSYF ATPSEVRANN 360 SYMPDIASST QEDEDFVNAA LAACKMDRTA SLQRVASLEH LQKRMCGGPA SSGSTS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002463740.1 | 0.0 | light-inducible protein CPRF2 | ||||
Swissprot | Q7X9A8 | 0.0 | RSBZ2_ORYSJ; bZIP transcription factor RISBZ2 | ||||
TrEMBL | A0A1D8RJ53 | 0.0 | A0A1D8RJ53_ELECO; Opaque 2 protein | ||||
STRING | Pavir.J01091.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3488 | 38 | 78 |
Publications ? help Back to Top | |||
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