PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01084.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | TCP | ||||||||
Protein Properties | Length: 695aa MW: 76123.1 Da PI: 10.6444 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 109.8 | 4e-34 | 398 | 478 | 3 | 83 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssas 71 ++drhski T++g RdRR+Rls+++a+ fF+Lqd+LGfdk+skt++WLl+q+kpai+ l + s Zmw_sc01084.1.g00090.1.am.mk 398 FRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDRLGFDKASKTVDWLLTQSKPAIDRLSEPthrgsgsgdaamS----- 473 689*********************************************************9995555543322221..... PP TCP 72 eceaesssssas 83 + +++ Zmw_sc01084.1.g00090.1.am.mk 474 -S------PMSA 478 .1......1111 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51369 | 34.922 | 399 | 457 | IPR017887 | Transcription factor TCP subgroup |
Pfam | PF03634 | 3.8E-33 | 399 | 479 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 695 aa Download sequence Send to blast |
MRRRSLMASS CSPHGRPADA NTAMDELSLG VIRWQAHGLG DGTHQRQVQG RRRDRVRCES 60 LAERRAVVTF PSRDRVPLVH RPVRVRLVWT LGRRRSQQWR HAETERAKAR SNPKIGTPRN 120 RSTMLSLPPL LCTQFCATRL AVRDSTEAAP HAAMESHATA APAVKMIQRM VRAMSRFEGQ 180 QGTTALAPSC AAMPSIDRDE QCVCVRARTW PLLLVSLQLI CRTGGGGGLA GRGCSPCPTC 240 TRQWRWTRHS LDPKICSSTC ERSCERGSGR GQEIAAAAAQ ELARSRSPLS LGSLQMLPYH 300 NPHHFGISQE QPHPNPATAG FPMGPPVVHP DQQHYDHHFF PGHAHYFNSE TLEAVLRPPR 360 AASEREVVGV MPVPQGASRN SVAGAGGQGN ARARKRPFRT DRHSKIRTAQ GVRDRRMRLS 420 LDVARDFFAL QDRLGFDKAS KTVDWLLTQS KPAIDRLSEP THRGSGSGDA AMSSPMSAEI 480 VKETAAAGSG KGSVEKTASR NSSFMDHSCE LDRLVSAAPV LGEYYYEFGE MMGSNEGEGD 540 DDGEYDEDGD FLDNMQSPKR ARESSSPFRK GKGKARSPAA AAAYGRGDMR RVGDETTTCL 600 YNSCGRTPGA TLASGRAGGL QRGDVRRLGP VFPGSGPASA RGRRSQTADR FVSEMNLPVD 660 RFYPPLARAL SIYFRRVAAR IVQSAVDHTK LLKLI |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4052 | 31 | 72 |