PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01075.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 380aa    MW: 42520.5 Da    PI: 7.0233
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01075.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-1182124446
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                      k+ rr+++NReAAr+sR+RKka+i++Le+   +L++  + L+
  Zmw_sc01075.1.g00060.1.sm.mkhc  82 EKAMRRLAQNREAARKSRLRKKAYIQQLETSRIKLSQLEQNLQ 124
                                     5889*************************98888877766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-779143IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.08281125IPR004827Basic-leucine zipper domain
PfamPF001703.0E-883124IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-883129No hitNo description
SuperFamilySSF579591.55E-784129No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
PfamPF141447.1E-24169243IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MTSASPQFAA PIRMGMYERP APTAPIGMWS NEPFKVDSGG QATSASTIME ADNKFDAPLE  60
DVPQVSLEPA RSTDQETSKP PEKAMRRLAQ NREAARKSRL RKKAYIQQLE TSRIKLSQLE  120
QNLQQARQQS VYANGNLGDS KLGFSGSVDP GVAAFEIEYS HWVDEQNRHT AELRNALLVQ  180
TTSDLEMRML VETGLKNYEH LFCIKTIAAN SDVFYIMSGV WRTPVERFFI WIGGFRPSEV  240
LKVPGCPCYC ILTPQLEPLT EPQRAFVCGL QQTSTQAEDA LLQGMEKLQQ NVTETLAGVD  300
PFASSEVYML QMASAVDKLK ELVGFVNQAD HLRRTTLQEM HKILTTRQAA KGLLVLGDYF  360
QRLRALSQLW AARPRESAVS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823704.10.0transcription factor TGAL6-like isoform X2
RefseqXP_025823705.10.0transcription factor TGAL6-like isoform X2
SwissprotA0A0P0WFC80.0TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLA0A0A9D9I60.0A0A0A9D9I6_ARUDO; Uncharacterized protein
STRINGPavir.Gb00388.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]