PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01073.1.g00200.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 414aa    MW: 45284.9 Da    PI: 6.8814
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01073.1.g00200.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09129169545
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                                     k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  Zmw_sc01073.1.g00200.1.sm.mkhc 129 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 169
                                     7889************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-8125188IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312127171IPR004827Basic-leucine zipper domain
PfamPF001708.5E-7129169IPR004827Basic-leucine zipper domain
CDDcd147081.08E-21129181No hitNo description
SuperFamilySSF579594.9E-7129172No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-7130173No hitNo description
PROSITE patternPS000360132147IPR004827Basic-leucine zipper domain
PfamPF141441.6E-33211286IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MVADGEYERS SGGGGYGRCR RGDAELRDCS ACHLISPVHK NTTTAATVAA RIDPSSLAQQ  60
MGAQPNVVPS TTGNIENWGE SAMAAASPMT DTSTDPDTDE GIQMFEQGQI AGPVASDSSD  120
KSRDKLDQKT LRRLAQNREA ARKSRLRKKA YIQNLESSRL KLTQLEQELQ RARQQGIFIS  180
STGDQSQSMS GNGALAFDME YARWLEEHNK HINELRAAVN AHAGDNDLRS IVDNVMAHYD  240
EIFKLKGVAA KADVFHVLSG MWKTPAERCF MWLGGFRSSE LLKLLAGQLE PLTDQQLVGI  300
SNLQQSSQQA EDALSQGMEA LQQSLAETLA SGSLGPAGSS GNVANYMGQM AMAMGKLGTL  360
ENFLRQADNL RLQTLQQMQR ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458658.10.0transcription factor TGAL1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK20.0C5XMK2_SORBI; Uncharacterized protein
STRINGSb03g037560.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185