PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01064.1.g00140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 745aa MW: 81207.3 Da PI: 10.0362 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.2 | 3.9e-28 | 648 | 701 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt eLH+rF+eav+qL G + A+Pk+i+++m+v+g+t+ehv+SHLQkYRl Zmw_sc01064.1.g00140.1.am.mk 648 KARMVWTAELHHRFIEAVAQL-GDKAAVPKAIVQVMNVEGITREHVASHLQKYRL 701 68*******************.99******************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.044 | 645 | 704 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.53E-18 | 646 | 705 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.2E-28 | 646 | 705 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.9E-23 | 648 | 701 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.1E-8 | 650 | 700 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 745 aa Download sequence Send to blast |
MGVAREVEAG GSSGRQAGNA CTAVRVELSG GDAERWAGEL DWGGDASASL SQGRSCRILF 60 CLSSSSFGTG GRQLCGHEQE IRSCKRRVKS YSTEAEARVH RARVEVTVSS TAMTRSAGID 120 EPRVHLASIK TGMPRGERGA FRPFQAGEGR QRIEAALTEA STAGPSPSAR RRPDPMQSKA 180 ITPLFSWPDG RRGRRPYSAA NNSSSSSYRC TSAPAGPGRV YWPAYEHGHG GQASRDSSRS 240 CAVLTVVVMV GSRAGLLFPA MLASSDEIIR PATRSHSRDA RMMQQYSACS VAFLRHQHDV 300 HSDQMRARVA SSARLERGLV GWSIVRHSLR IFYCDRQFMG HPGHASETMV LAPTSMDVDE 360 KQDAHGAALD RERRPAGRPA GTGSPISPPA WLSTYLVDIY LRPRARRVRT LPSPLRRGMH 420 RKALSLTLQP AVGPFAAMMV RRVRERQCDH CEAKEAAVAV SDVTKTPGTT STGPRVFRTR 480 LLTVTTAHRP ARLAQLEQTP RAATGRTARV CAAPGERNNS SEYYVMSSPR GGRPRDSPSP 540 SSTSPPPPPP DMGTGRSECD RVLEWESGLP TAAELTPLSR PLIPRALAAA FRIGGVAGAS 600 DSPTSQLSLP WDDDDDDEEE EEDEEEDRDR DREMENAATG GGKLGKKKAR MVWTAELHHR 660 FIEAVAQLGD KAAVPKAIVQ VMNVEGITRE HVASHLQKYR LYLKRKRTTH AAPPRLRVMP 720 PTHGFSFSSQ QSTDASERSD YCEKV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5lxu_A | 2e-21 | 648 | 704 | 1 | 57 | Transcription factor LUX |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1620 | 34 | 105 |