PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01064.1.g00140.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 745aa    MW: 81207.3 Da    PI: 10.0362
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01064.1.g00140.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.23.9e-28648701155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   k+r++Wt eLH+rF+eav+qL G + A+Pk+i+++m+v+g+t+ehv+SHLQkYRl
  Zmw_sc01064.1.g00140.1.am.mk 648 KARMVWTAELHHRFIEAVAQL-GDKAAVPKAIVQVMNVEGITREHVASHLQKYRL 701
                                   68*******************.99******************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.044645704IPR017930Myb domain
SuperFamilySSF466897.53E-18646705IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.2E-28646705IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-23648701IPR006447Myb domain, plants
PfamPF002491.1E-8650700IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    Send to blast
MGVAREVEAG GSSGRQAGNA CTAVRVELSG GDAERWAGEL DWGGDASASL SQGRSCRILF  60
CLSSSSFGTG GRQLCGHEQE IRSCKRRVKS YSTEAEARVH RARVEVTVSS TAMTRSAGID  120
EPRVHLASIK TGMPRGERGA FRPFQAGEGR QRIEAALTEA STAGPSPSAR RRPDPMQSKA  180
ITPLFSWPDG RRGRRPYSAA NNSSSSSYRC TSAPAGPGRV YWPAYEHGHG GQASRDSSRS  240
CAVLTVVVMV GSRAGLLFPA MLASSDEIIR PATRSHSRDA RMMQQYSACS VAFLRHQHDV  300
HSDQMRARVA SSARLERGLV GWSIVRHSLR IFYCDRQFMG HPGHASETMV LAPTSMDVDE  360
KQDAHGAALD RERRPAGRPA GTGSPISPPA WLSTYLVDIY LRPRARRVRT LPSPLRRGMH  420
RKALSLTLQP AVGPFAAMMV RRVRERQCDH CEAKEAAVAV SDVTKTPGTT STGPRVFRTR  480
LLTVTTAHRP ARLAQLEQTP RAATGRTARV CAAPGERNNS SEYYVMSSPR GGRPRDSPSP  540
SSTSPPPPPP DMGTGRSECD RVLEWESGLP TAAELTPLSR PLIPRALAAA FRIGGVAGAS  600
DSPTSQLSLP WDDDDDDEEE EEDEEEDRDR DREMENAATG GGKLGKKKAR MVWTAELHHR  660
FIEAVAQLGD KAAVPKAIVQ VMNVEGITRE HVASHLQKYR LYLKRKRTTH AAPPRLRVMP  720
PTHGFSFSSQ QSTDASERSD YCEKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A2e-21648704157Transcription factor LUX
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP162034105