PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01063.1.g00210.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 381aa MW: 40923.1 Da PI: 5.8998

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01063.1.g00210.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	112.1	3.5e-35	86	185	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkep 78 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ ++sg+ + Zmw_sc01063.1.g00210.1.sm.mk 86 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYHNCVSRlRDSGDAF 166 79**********************99877778***********************************8999 PP DUF573 79 sfskehdqkifelskkiWg 97 sf+++h+q ife+++ iW+ Zmw_sc01063.1.g00210.1.sm.mk 167 SFRSPHEQAIFEIARNIWR 185 ****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.6E-31	87	184	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MSPTGDDPSA TAAAAAPGGT TFPDADGGGH SEDGDFPHAH LLDPSEPGLP DPASSSAAVL 60 PHAVPAGGSG SCGPVTSGNG SERRPLFQRL WTEEDEIVIL RGFAEFTAAR GTAFASHQYD 120 TDPFYEDMRR RLQLDFSKSQ LVEKLRRLKR KYHNCVSRLR DSGDAFSFRS PHEQAIFEIA 180 RNIWRPANKH GRDPAADSDD EDAVASAAAT AVPGSTSPNG KVMSPSSGRQ RRRRRATEAA 240 SAPAPAMNMV QPPQPVQLPV SVPVKMDDSP ALTQTPMPVM VIMDGSEPLR LPAMSPQSGG 300 PDAEKNCLIP LLKDMISAVI NVGVNPFGAK LPELPLGLPM EGEKWRKQRI LELEVYLKRI 360 ELLQDQVKAT LDELKSSTPG T

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MSPTGDDPSA TAAAAAPGGT TFPDADGGGH SEDGDFPHAH LLDPSEPGLP DPASSSAAVL  60
PHAVPAGGSG SCGPVTSGNG SERRPLFQRL WTEEDEIVIL RGFAEFTAAR GTAFASHQYD  120
TDPFYEDMRR RLQLDFSKSQ LVEKLRRLKR KYHNCVSRLR DSGDAFSFRS PHEQAIFEIA  180
RNIWRPANKH GRDPAADSDD EDAVASAAAT AVPGSTSPNG KVMSPSSGRQ RRRRRATEAA  240
SAPAPAMNMV QPPQPVQLPV SVPVKMDDSP ALTQTPMPVM VIMDGSEPLR LPAMSPQSGG  300
PDAEKNCLIP LLKDMISAVI NVGVNPFGAK LPELPLGLPM EGEKWRKQRI LELEVYLKRI  360
ELLQDQVKAT LDELKSSTPG T

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002461092.1	0.0	probable transcription factor At3g04930
TrEMBL	A0A1E5UXC0	0.0	A0A1E5UXC0_9POAL; Uncharacterized protein
STRING	Sb02g040550.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP974	37	123