PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01052.1.g00210.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 345aa MW: 36329.6 Da PI: 8.3792

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01052.1.g00210.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	205.6	1.5e-63	16	158	1	145
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleea 79 gg+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkgsk++e++ Zmw_sc01052.1.g00210.1.sm.mkhc 16 GGGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGSKRPERM 94 689************************************************************************** PP DUF822 80 eaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlsl 145 + +g s s sp+ss+q +sp++sy+asp+sssfps +s+ +++ ++ + +lp+l++ ++ Zmw_sc01052.1.g00210.1.sm.mkhc 95 DGIGVSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPPTDIangidgNPILPWLKTFTN 158 **************........999999999999999999998887776655556666777777777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.3E-61	17	155	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
MDSGTGGAFV PGGGGGGGGR MPTWRERENN KRRERRRRAI AAKIFAGLRA HGGYKLPKHC 60 DNNEVLKALC NEAGWVVEPD GTTYRKGSKR PERMDGIGVS VSPSPCSSYQ PSPRASYNAS 120 PTSSSFPSGA SSPFLPPTDI ANGIDGNPIL PWLKTFTNGT ASNKHPLLPP LLIHGGSISA 180 PVTPPLSSPT ARTPRMKTDW DESAVQPPWR GTDSPSIVNS TPPSPGRSAV PDPAWLAGIQ 240 IASTSPSSPT FSLVSTNPFS VFNEAIRVDN SSRMCAPGQS GTCSPAIPGM LGRPDVHMMD 300 AVSDEFAFGS SANCGQQAAG LLRAWEGERI HEDSGSDDLD VTLKL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

MDSGTGGAFV PGGGGGGGGR MPTWRERENN KRRERRRRAI AAKIFAGLRA HGGYKLPKHC  60
DNNEVLKALC NEAGWVVEPD GTTYRKGSKR PERMDGIGVS VSPSPCSSYQ PSPRASYNAS  120
PTSSSFPSGA SSPFLPPTDI ANGIDGNPIL PWLKTFTNGT ASNKHPLLPP LLIHGGSISA  180
PVTPPLSSPT ARTPRMKTDW DESAVQPPWR GTDSPSIVNS TPPSPGRSAV PDPAWLAGIQ  240
IASTSPSSPT FSLVSTNPFS VFNEAIRVDN SSRMCAPGQS GTCSPAIPGM LGRPDVHMMD  300
AVSDEFAFGS SANCGQQAAG LLRAWEGERI HEDSGSDDLD VTLKL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-21	20	89	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-21	20	89	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-21	20	89	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-21	20	89	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817932.1	1e-178	protein BZR1 homolog 2
Swissprot	Q0JPT4	1e-163	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	A0A2S3HYR9	1e-176	A0A2S3HYR9_9POAL; Uncharacterized protein
STRING	Pavir.Ea00221.1.p	1e-172	(Panicum virgatum)
STRING	Sb03g002480.1	1e-174	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]